Nosokomycin A

Details

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Internal ID e29f3735-0b34-4663-876b-ca8672114bd5
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2S,3S,4S,5R,6R)-6-[(2R,3S,4R,5R,6S)-5-acetamido-6-[(2R,3S,4R,5R,6S)-5-acetamido-6-[(2R,3R,4R,5S,6S)-6-carbamoyl-4-carbamoyloxy-2-[[(2R)-2-carboxy-2-[(2Z,5E,13E)-3,8,8,14,18-pentamethyl-11-methylidenenonadeca-2,5,13,17-tetraenoxy]ethoxy]-hydroxyphosphoryl]oxy-5-hydroxy-5-methyloxan-3-yl]oxy-4-hydroxy-2-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-3-yl]oxy-4-hydroxy-2-methyloxan-3-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C64H103N4O33P/c1-28(2)15-14-17-29(3)18-19-31(5)20-23-63(9,10)22-13-12-16-30(4)21-24-89-37(55(81)82)27-91-102(87,88)101-61-51(52(100-62(66)85)64(11,86)53(99-61)54(65)80)98-58-39(68-34(8)71)42(74)49(36(94-58)26-90-59-46(78)43(75)40(72)35(25-69)93-59)96-57-38(67-33(7)70)41(73)48(32(6)92-57)95-60-47(79)44(76)45(77)50(97-60)56(83)84/h12-13,15,18,21,32,35-53,57-61,69,72-79,86H,5,14,16-17,19-20,22-27H2,1-4,6-11H3,(H2,65,80)(H2,66,85)(H,67,70)(H,68,71)(H,81,82)(H,83,84)(H,87,88)/b13-12+,29-18+,30-21-/t32-,35-,36-,37-,38-,39-,40-,41-,42-,43+,44+,45+,46-,47-,48-,49-,50+,51-,52-,53-,57+,58+,59-,60-,61-,64+/m1/s1
InChI Key AFBSECGAINOYAH-OQDLKAIYSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C64H103N4O33P
Molecular Weight 1487.50 g/mol
Exact Mass 1486.6242187 g/mol
Topological Polar Surface Area (TPSA) 579.00 Ų
XlogP -0.90
Atomic LogP (AlogP) -2.19
H-Bond Acceptor 30
H-Bond Donor 17
Rotatable Bonds 36

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Nosokomycin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7507 75.07%
Caco-2 - 0.8583 85.83%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.6635 66.35%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8012 80.12%
OATP1B3 inhibitior + 0.9277 92.77%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8526 85.26%
BSEP inhibitior + 0.9337 93.37%
P-glycoprotein inhibitior + 0.7423 74.23%
P-glycoprotein substrate + 0.8157 81.57%
CYP3A4 substrate + 0.7548 75.48%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8627 86.27%
CYP3A4 inhibition - 0.6137 61.37%
CYP2C9 inhibition - 0.7721 77.21%
CYP2C19 inhibition - 0.7299 72.99%
CYP2D6 inhibition - 0.8853 88.53%
CYP1A2 inhibition - 0.7800 78.00%
CYP2C8 inhibition + 0.8281 82.81%
CYP inhibitory promiscuity - 0.8989 89.89%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9000 90.00%
Carcinogenicity (trinary) Non-required 0.5240 52.40%
Eye corrosion - 0.9780 97.80%
Eye irritation - 0.8959 89.59%
Skin irritation - 0.7535 75.35%
Skin corrosion - 0.9139 91.39%
Ames mutagenesis + 0.5346 53.46%
Human Ether-a-go-go-Related Gene inhibition + 0.7260 72.60%
Micronuclear + 0.7700 77.00%
Hepatotoxicity - 0.5700 57.00%
skin sensitisation - 0.8219 82.19%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.7708 77.08%
Acute Oral Toxicity (c) III 0.5902 59.02%
Estrogen receptor binding + 0.5527 55.27%
Androgen receptor binding + 0.7401 74.01%
Thyroid receptor binding + 0.7367 73.67%
Glucocorticoid receptor binding + 0.8085 80.85%
Aromatase binding + 0.7321 73.21%
PPAR gamma + 0.8032 80.32%
Honey bee toxicity - 0.5758 57.58%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9828 98.28%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.97% 91.11%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 98.44% 87.67%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 96.87% 97.29%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.77% 85.14%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 96.15% 81.11%
CHEMBL3401 O75469 Pregnane X receptor 95.17% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.81% 96.09%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 94.16% 96.47%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.98% 97.25%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.80% 99.17%
CHEMBL2581 P07339 Cathepsin D 93.71% 98.95%
CHEMBL2413 P32246 C-C chemokine receptor type 1 92.66% 89.50%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 92.39% 96.00%
CHEMBL340 P08684 Cytochrome P450 3A4 91.67% 91.19%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.52% 96.61%
CHEMBL233 P35372 Mu opioid receptor 90.53% 97.93%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 90.14% 95.58%
CHEMBL3714130 P46095 G-protein coupled receptor 6 89.34% 97.36%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 87.52% 91.24%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 87.47% 96.90%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 87.24% 94.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 86.86% 93.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.67% 89.00%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 86.59% 89.34%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 86.30% 92.29%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.41% 95.83%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.15% 100.00%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 83.87% 82.50%
CHEMBL4581 P52732 Kinesin-like protein 1 82.92% 93.18%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.86% 96.21%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.76% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.75% 99.23%
CHEMBL3286 P00749 Urokinase-type plasminogen activator 82.71% 97.88%
CHEMBL251 P29274 Adenosine A2a receptor 82.62% 94.40%
CHEMBL2474 P53582 Methionine aminopeptidase 1 82.61% 97.09%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 82.01% 92.32%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.36% 95.50%
CHEMBL5255 O00206 Toll-like receptor 4 80.89% 92.50%
CHEMBL3437 Q16853 Amine oxidase, copper containing 80.57% 94.00%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 80.36% 95.71%
CHEMBL4015 P41597 C-C chemokine receptor type 2 80.18% 98.57%
CHEMBL5028 O14672 ADAM10 80.14% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 102041020
LOTUS LTS0041678
wikiData Q104910914