Nortrachelogenin-5'-C-beta-glucoside

Details

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Internal ID 4ae827c8-422a-4026-8d36-39cb36fe5dc9
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name (3S,4S)-3-hydroxy-4-[(4-hydroxy-3-methoxyphenyl)methyl]-3-[[4-hydroxy-3-methoxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl]methyl]oxolan-2-one
SMILES (Canonical) COC1=CC(=CC(=C1O)C2C(C(C(C(O2)CO)O)O)O)CC3(C(COC3=O)CC4=CC(=C(C=C4)O)OC)O
SMILES (Isomeric) COC1=CC(=CC(=C1O)[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)C[C@@]3([C@H](COC3=O)CC4=CC(=C(C=C4)O)OC)O
InChI InChI=1S/C26H32O12/c1-35-17-7-12(3-4-16(17)28)5-14-11-37-25(33)26(14,34)9-13-6-15(20(29)18(8-13)36-2)24-23(32)22(31)21(30)19(10-27)38-24/h3-4,6-8,14,19,21-24,27-32,34H,5,9-11H2,1-2H3/t14-,19+,21+,22-,23+,24-,26-/m0/s1
InChI Key SDMZUDFGXDYAQB-GQJHZGJWSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C26H32O12
Molecular Weight 536.50 g/mol
Exact Mass 536.18937645 g/mol
Topological Polar Surface Area (TPSA) 196.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.68
H-Bond Acceptor 12
H-Bond Donor 7
Rotatable Bonds 8

Synonyms

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858127-39-6
Nortrachelogenin 5'-C-|A-glucopyranoside
HY-N11988
AKOS040763522
FS-8346
CS-0890403

2D Structure

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2D Structure of Nortrachelogenin-5'-C-beta-glucoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5175 51.75%
Caco-2 - 0.8653 86.53%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.7898 78.98%
OATP2B1 inhibitior - 0.8560 85.60%
OATP1B1 inhibitior + 0.8326 83.26%
OATP1B3 inhibitior + 0.9545 95.45%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.6295 62.95%
P-glycoprotein inhibitior - 0.4639 46.39%
P-glycoprotein substrate - 0.5755 57.55%
CYP3A4 substrate + 0.6513 65.13%
CYP2C9 substrate - 0.7983 79.83%
CYP2D6 substrate - 0.7805 78.05%
CYP3A4 inhibition - 0.8303 83.03%
CYP2C9 inhibition - 0.8901 89.01%
CYP2C19 inhibition - 0.8431 84.31%
CYP2D6 inhibition - 0.9173 91.73%
CYP1A2 inhibition - 0.8994 89.94%
CYP2C8 inhibition + 0.6208 62.08%
CYP inhibitory promiscuity - 0.8162 81.62%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6336 63.36%
Eye corrosion - 0.9913 99.13%
Eye irritation - 0.9213 92.13%
Skin irritation - 0.8356 83.56%
Skin corrosion - 0.9539 95.39%
Ames mutagenesis + 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6641 66.41%
Micronuclear - 0.5200 52.00%
Hepatotoxicity - 0.5625 56.25%
skin sensitisation - 0.8706 87.06%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.7911 79.11%
Acute Oral Toxicity (c) III 0.6166 61.66%
Estrogen receptor binding + 0.8402 84.02%
Androgen receptor binding + 0.6256 62.56%
Thyroid receptor binding + 0.5238 52.38%
Glucocorticoid receptor binding + 0.5944 59.44%
Aromatase binding + 0.5477 54.77%
PPAR gamma + 0.6459 64.59%
Honey bee toxicity - 0.7917 79.17%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.8906 89.06%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.78% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.90% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.50% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.35% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.99% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.60% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.46% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 92.33% 92.62%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.26% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.55% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.34% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.14% 89.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 87.90% 96.61%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.09% 99.17%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.29% 97.14%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.22% 97.09%
CHEMBL4208 P20618 Proteasome component C5 83.31% 90.00%
CHEMBL5555 O00767 Acyl-CoA desaturase 82.48% 97.50%
CHEMBL220 P22303 Acetylcholinesterase 81.78% 94.45%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 81.20% 99.15%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Trachelospermum jasminoides

Cross-Links

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PubChem 154809473
LOTUS LTS0002123
wikiData Q105250748