Nordeoxyverrucosidin

Details

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Internal ID a1d6a1bb-0d17-4866-b981-1870215572fe
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones
IUPAC Name 6-[(2E,4E,6E)-4,6-dimethyl-7-[(1S,2S,4R,5R)-2,4,5-trimethyl-3,6-dioxabicyclo[3.1.0]hexan-2-yl]hepta-2,4,6-trien-2-yl]-4-methoxy-5-methylpyran-2-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C23H30O5/c1-13(10-15(3)20-16(4)18(25-8)11-19(24)26-20)9-14(2)12-22(6)21-23(7,28-21)17(5)27-22/h9-12,17,21H,1-8H3/b13-9+,14-12+,15-10+/t17-,21+,22+,23-/m1/s1
InChI Key LRRJYOPCACBLEA-MHWPPRIHSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C23H30O5
Molecular Weight 386.50 g/mol
Exact Mass 386.20932405 g/mol
Topological Polar Surface Area (TPSA) 57.30 Ų
XlogP 4.20
Atomic LogP (AlogP) 4.59
H-Bond Acceptor 5
H-Bond Donor 0
Rotatable Bonds 5

Synonyms

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RefChem:166587
CHEBI:218374
6-[(2E,4E,6E)-4,6-dimethyl-7-[(1S,2S,4R,5R)-2,4,5-trimethyl-3,6-dioxabicyclo[3.1.0]hexan-2-yl]hepta-2,4,6-trien-2-yl]-4-methoxy-5-methylpyran-2-one

2D Structure

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2D Structure of Nordeoxyverrucosidin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9857 98.57%
Caco-2 + 0.5893 58.93%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.6852 68.52%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8935 89.35%
OATP1B3 inhibitior + 0.9525 95.25%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.9410 94.10%
P-glycoprotein inhibitior + 0.7859 78.59%
P-glycoprotein substrate - 0.5944 59.44%
CYP3A4 substrate + 0.6200 62.00%
CYP2C9 substrate - 0.6491 64.91%
CYP2D6 substrate - 0.8524 85.24%
CYP3A4 inhibition + 0.7660 76.60%
CYP2C9 inhibition - 0.8565 85.65%
CYP2C19 inhibition + 0.8542 85.42%
CYP2D6 inhibition - 0.8403 84.03%
CYP1A2 inhibition - 0.5405 54.05%
CYP2C8 inhibition - 0.6320 63.20%
CYP inhibitory promiscuity + 0.8202 82.02%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Danger 0.5667 56.67%
Eye corrosion - 0.9773 97.73%
Eye irritation - 0.9104 91.04%
Skin irritation - 0.7330 73.30%
Skin corrosion - 0.9600 96.00%
Ames mutagenesis - 0.5170 51.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7304 73.04%
Micronuclear + 0.6100 61.00%
Hepatotoxicity - 0.6083 60.83%
skin sensitisation - 0.7023 70.23%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.7206 72.06%
Acute Oral Toxicity (c) III 0.3753 37.53%
Estrogen receptor binding + 0.8471 84.71%
Androgen receptor binding + 0.7684 76.84%
Thyroid receptor binding + 0.7322 73.22%
Glucocorticoid receptor binding + 0.6780 67.80%
Aromatase binding + 0.6992 69.92%
PPAR gamma + 0.8701 87.01%
Honey bee toxicity - 0.7626 76.26%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9673 96.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.49% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 96.89% 94.75%
CHEMBL325 Q13547 Histone deacetylase 1 95.99% 95.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.56% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.54% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.20% 94.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 90.04% 85.14%
CHEMBL3922 P50579 Methionine aminopeptidase 2 89.66% 97.28%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.12% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 87.59% 92.94%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.47% 99.23%
CHEMBL2581 P07339 Cathepsin D 86.25% 98.95%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 86.01% 91.07%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.00% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 84.78% 96.09%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.08% 97.14%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 80.25% 89.44%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 100899241
LOTUS LTS0012487
wikiData Q105156279