Nodulapeptin 863

Details

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Internal ID ebf2d112-f522-4b75-8a26-fc9cc48f77fa
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Cyclic peptides
IUPAC Name 2-[[3-(acetyloxymethyl)-12-butan-2-yl-7-methyl-2,5,8,11,14-pentaoxo-6,9-bis(2-phenylethyl)-1,4,7,10,13-pentazacyclononadec-15-yl]carbamoylamino]-3-methylpentanoic acid
SMILES (Canonical) CCC(C)C1C(=O)NC(C(=O)N(C(C(=O)NC(C(=O)NCCCCC(C(=O)N1)NC(=O)NC(C(C)CC)C(=O)O)COC(=O)C)CCC2=CC=CC=C2)C)CCC3=CC=CC=C3
SMILES (Isomeric) CCC(C)C1C(=O)NC(C(=O)N(C(C(=O)NC(C(=O)NCCCCC(C(=O)N1)NC(=O)NC(C(C)CC)C(=O)O)COC(=O)C)CCC2=CC=CC=C2)C)CCC3=CC=CC=C3
InChI InChI=1S/C45H65N7O10/c1-7-28(3)37-42(57)47-34(24-22-31-17-11-9-12-18-31)43(58)52(6)36(25-23-32-19-13-10-14-20-32)41(56)48-35(27-62-30(5)53)39(54)46-26-16-15-21-33(40(55)50-37)49-45(61)51-38(44(59)60)29(4)8-2/h9-14,17-20,28-29,33-38H,7-8,15-16,21-27H2,1-6H3,(H,46,54)(H,47,57)(H,48,56)(H,50,55)(H,59,60)(H2,49,51,61)
InChI Key JWTLSWXNBWLNPD-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C45H65N7O10
Molecular Weight 864.00 g/mol
Exact Mass 863.47929130 g/mol
Topological Polar Surface Area (TPSA) 241.00 Ų
XlogP 4.80
Atomic LogP (AlogP) 2.61
H-Bond Acceptor 9
H-Bond Donor 7
Rotatable Bonds 15

Synonyms

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2-[[3-(acetyloxymethyl)-12-butan-2-yl-7-methyl-2,5,8,11,14-pentaoxo-6,9-bis(2-phenylethyl)-1,4,7,10,13-pentazacyclononadec-15-yl]carbamoylamino]-3-methylpentanoic acid
2-(((3-((acetyloxy)methyl)-12-(butan-2-yl)-2,5,11,14-tetrahydroxy-7-methyl-8-oxo-6,9-bis(2-phenylethyl)-1,4,7,10,13-pentaazacyclononadeca-1,4,10,13-tetraen-15-yl)-C-hydroxycarbonimidoyl)amino)-3-methylpentanoate
2-((3-(acetyloxymethyl)-12-butan-2-yl-7-methyl-2,5,8,11,14-pentaoxo-6,9-bis(2-phenylethyl)-1,4,7,10,13-pentazacyclononadec-15-yl)carbamoylamino)-3-methylpentanoic acid
2-[({3-[(acetyloxy)methyl]-12-(butan-2-yl)-2,5,11,14-tetrahydroxy-7-methyl-8-oxo-6,9-bis(2-phenylethyl)-1,4,7,10,13-pentaazacyclononadeca-1,4,10,13-tetraen-15-yl}-C-hydroxycarbonimidoyl)amino]-3-methylpentanoate
RefChem:166329
NP 863
2-(3-(3-(acetoxymethyl)-12-(sec-butyl)-7-methyl-2,5,8,11,14-pentaoxo-6,9-diphenethyl-1,4,7,10,13-pentaazacyclononadecan-15-yl)ureido)-3-methylpentanoic acid
CHEBI:213756
DTXSID601335624
N-({3-[(Acetyloxy)methyl]-12-(butan-2-yl)-7-methyl-2,5,8,11,14-pentaoxo-6,9-bis(2-phenylethyl)-1,4,7,10,13-pentaazacyclononadecan-15-yl}carbamoyl)isoleucine

2D Structure

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2D Structure of Nodulapeptin 863

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7639 76.39%
Caco-2 - 0.8668 86.68%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.5544 55.44%
OATP2B1 inhibitior - 0.7031 70.31%
OATP1B1 inhibitior + 0.8327 83.27%
OATP1B3 inhibitior + 0.9266 92.66%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9382 93.82%
P-glycoprotein inhibitior + 0.7682 76.82%
P-glycoprotein substrate + 0.8016 80.16%
CYP3A4 substrate + 0.7069 70.69%
CYP2C9 substrate + 0.6063 60.63%
CYP2D6 substrate - 0.8717 87.17%
CYP3A4 inhibition + 0.6764 67.64%
CYP2C9 inhibition - 0.6462 64.62%
CYP2C19 inhibition - 0.8497 84.97%
CYP2D6 inhibition - 0.8800 88.00%
CYP1A2 inhibition - 0.8901 89.01%
CYP2C8 inhibition + 0.6225 62.25%
CYP inhibitory promiscuity - 0.8817 88.17%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8000 80.00%
Carcinogenicity (trinary) Non-required 0.6465 64.65%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.9130 91.30%
Skin irritation - 0.7771 77.71%
Skin corrosion - 0.9433 94.33%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4149 41.49%
Micronuclear + 0.8500 85.00%
Hepatotoxicity + 0.5981 59.81%
skin sensitisation - 0.8937 89.37%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity - 0.7407 74.07%
Acute Oral Toxicity (c) III 0.6683 66.83%
Estrogen receptor binding + 0.8362 83.62%
Androgen receptor binding + 0.7077 70.77%
Thyroid receptor binding + 0.5957 59.57%
Glucocorticoid receptor binding + 0.6544 65.44%
Aromatase binding + 0.6053 60.53%
PPAR gamma + 0.7766 77.66%
Honey bee toxicity - 0.7886 78.86%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.9621 96.21%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.82% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.34% 96.09%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 95.01% 94.62%
CHEMBL226 P30542 Adenosine A1 receptor 94.82% 95.93%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 93.00% 93.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.59% 94.45%
CHEMBL221 P23219 Cyclooxygenase-1 90.98% 90.17%
CHEMBL3202 P48147 Prolyl endopeptidase 90.67% 90.65%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 89.81% 97.64%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.77% 97.09%
CHEMBL5103 Q969S8 Histone deacetylase 10 89.39% 90.08%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.05% 97.25%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 88.07% 92.67%
CHEMBL3359 P21462 Formyl peptide receptor 1 87.54% 93.56%
CHEMBL255 P29275 Adenosine A2b receptor 86.92% 98.59%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 85.93% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.85% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.75% 86.33%
CHEMBL268 P43235 Cathepsin K 84.43% 96.85%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.63% 92.62%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 82.72% 98.33%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.41% 93.03%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 81.91% 95.00%
CHEMBL2413 P32246 C-C chemokine receptor type 1 81.20% 89.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.09% 95.89%
CHEMBL4208 P20618 Proteasome component C5 80.82% 90.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.19% 89.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.12% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 146683777
LOTUS LTS0201736
wikiData Q104203245