Nimbocinol

Details

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Internal ID 9c7a1827-5e13-4f57-82bd-7d6cddb302af
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids > Limonoids
IUPAC Name (5R,7R,8R,9R,10R,13S,17R)-17-(furan-3-yl)-7-hydroxy-4,4,8,10,13-pentamethyl-6,7,9,11,12,17-hexahydro-5H-cyclopenta[a]phenanthrene-3,16-dione
SMILES (Canonical) CC1(C2CC(C3(C(C2(C=CC1=O)C)CCC4(C3=CC(=O)C4C5=COC=C5)C)C)O)C
SMILES (Isomeric) C[C@@]12CC[C@@H]3[C@]4(C=CC(=O)C([C@@H]4C[C@H]([C@]3(C1=CC(=O)[C@H]2C5=COC=C5)C)O)(C)C)C
InChI InChI=1S/C26H32O4/c1-23(2)18-13-21(29)26(5)17(24(18,3)10-7-20(23)28)6-9-25(4)19(26)12-16(27)22(25)15-8-11-30-14-15/h7-8,10-12,14,17-18,21-22,29H,6,9,13H2,1-5H3/t17-,18+,21-,22-,24-,25-,26-/m1/s1
InChI Key BAMHPKTZTBFUOH-WWBRISJOSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C26H32O4
Molecular Weight 408.50 g/mol
Exact Mass 408.23005950 g/mol
Topological Polar Surface Area (TPSA) 67.50 Ų
XlogP 4.30
Atomic LogP (AlogP) 4.85
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 1

Synonyms

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CHEBI:67281
CHEMBL1774401
Q27135740
(5alpha,7alpha,13alpha,17alpha)-17-(furan-3-yl)-7-hydroxy-4,4,8-trimethylandrosta-1,14-diene-3,16-dione
(5R,7R,8R,9R,10R,13S,17R)-17-(furan-3-yl)-7-hydroxy-4,4,8,10,13-pentamethyl-6,7,9,11,12,17-hexahydro-5H-cyclopenta[a]phenanthrene-3,16-dione

2D Structure

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2D Structure of Nimbocinol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9967 99.67%
Caco-2 - 0.5275 52.75%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.7970 79.70%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior - 0.3672 36.72%
OATP1B3 inhibitior + 0.9412 94.12%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.8592 85.92%
P-glycoprotein inhibitior - 0.4358 43.58%
P-glycoprotein substrate - 0.6587 65.87%
CYP3A4 substrate + 0.6879 68.79%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8349 83.49%
CYP3A4 inhibition + 0.5477 54.77%
CYP2C9 inhibition - 0.7352 73.52%
CYP2C19 inhibition - 0.7515 75.15%
CYP2D6 inhibition - 0.8959 89.59%
CYP1A2 inhibition - 0.6296 62.96%
CYP2C8 inhibition + 0.5450 54.50%
CYP inhibitory promiscuity - 0.7068 70.68%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.4877 48.77%
Eye corrosion - 0.9936 99.36%
Eye irritation - 0.9620 96.20%
Skin irritation + 0.5000 50.00%
Skin corrosion - 0.9047 90.47%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8248 82.48%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.5426 54.26%
skin sensitisation - 0.7536 75.36%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.7528 75.28%
Acute Oral Toxicity (c) III 0.6119 61.19%
Estrogen receptor binding + 0.8659 86.59%
Androgen receptor binding + 0.6912 69.12%
Thyroid receptor binding + 0.7555 75.55%
Glucocorticoid receptor binding + 0.8138 81.38%
Aromatase binding + 0.7511 75.11%
PPAR gamma + 0.6663 66.63%
Honey bee toxicity - 0.8679 86.79%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9937 99.37%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137262 O60341 LSD1/CoREST complex 95.57% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.97% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.65% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.57% 100.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.47% 85.14%
CHEMBL2581 P07339 Cathepsin D 89.76% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.49% 99.23%
CHEMBL3038469 P24941 CDK2/Cyclin A 87.96% 91.38%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 85.69% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.68% 95.56%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 85.41% 82.69%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.54% 89.00%
CHEMBL1937 Q92769 Histone deacetylase 2 83.01% 94.75%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.94% 95.89%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.47% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Azadirachta indica
Melia azedarach

Cross-Links

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PubChem 13875741
NPASS NPC185456
LOTUS LTS0114419
wikiData Q27135740