Nimbionol

Details

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Internal ID b5aa3941-9504-4d58-aa98-d04da4b3f511
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name (2S,4aS,10aR)-2,6-dihydroxy-7-methoxy-1,1,4a-trimethyl-3,4,10,10a-tetrahydro-2H-phenanthren-9-one
SMILES (Canonical) CC1(C(CCC2(C1CC(=O)C3=CC(=C(C=C32)O)OC)C)O)C
SMILES (Isomeric) C[C@]12CC[C@@H](C([C@@H]1CC(=O)C3=CC(=C(C=C23)O)OC)(C)C)O
InChI InChI=1S/C18H24O4/c1-17(2)15-9-12(19)10-7-14(22-4)13(20)8-11(10)18(15,3)6-5-16(17)21/h7-8,15-16,20-21H,5-6,9H2,1-4H3/t15-,16-,18+/m0/s1
InChI Key JKTSDLANZJEZMK-XYJFISCASA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C18H24O4
Molecular Weight 304.40 g/mol
Exact Mass 304.16745924 g/mol
Topological Polar Surface Area (TPSA) 66.80 Ų
XlogP 2.90
Atomic LogP (AlogP) 3.04
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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Nimbionol
DTXSID70923131
3,12-Dihydroxy-13-methoxypodocarpa-8(14),9(11),12-trien-7-one

2D Structure

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2D Structure of Nimbionol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9959 99.59%
Caco-2 + 0.7665 76.65%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.8713 87.13%
OATP2B1 inhibitior - 0.8606 86.06%
OATP1B1 inhibitior + 0.9014 90.14%
OATP1B3 inhibitior + 0.8755 87.55%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8071 80.71%
BSEP inhibitior - 0.7353 73.53%
P-glycoprotein inhibitior - 0.9200 92.00%
P-glycoprotein substrate - 0.8665 86.65%
CYP3A4 substrate + 0.6457 64.57%
CYP2C9 substrate - 0.5905 59.05%
CYP2D6 substrate - 0.7032 70.32%
CYP3A4 inhibition - 0.5268 52.68%
CYP2C9 inhibition - 0.7759 77.59%
CYP2C19 inhibition - 0.7739 77.39%
CYP2D6 inhibition - 0.9364 93.64%
CYP1A2 inhibition + 0.8760 87.60%
CYP2C8 inhibition - 0.6985 69.85%
CYP inhibitory promiscuity - 0.9276 92.76%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8300 83.00%
Carcinogenicity (trinary) Non-required 0.6560 65.60%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.6219 62.19%
Skin irritation - 0.5677 56.77%
Skin corrosion - 0.9533 95.33%
Ames mutagenesis - 0.8300 83.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5968 59.68%
Micronuclear - 0.9300 93.00%
Hepatotoxicity - 0.5959 59.59%
skin sensitisation - 0.8647 86.47%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity - 0.6944 69.44%
Acute Oral Toxicity (c) III 0.6162 61.62%
Estrogen receptor binding - 0.6000 60.00%
Androgen receptor binding - 0.6467 64.67%
Thyroid receptor binding + 0.6869 68.69%
Glucocorticoid receptor binding + 0.6813 68.13%
Aromatase binding + 0.5786 57.86%
PPAR gamma + 0.7224 72.24%
Honey bee toxicity - 0.6937 69.37%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5349 53.49%
Fish aquatic toxicity + 0.9898 98.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.87% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.29% 96.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 95.25% 92.94%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.45% 95.56%
CHEMBL2581 P07339 Cathepsin D 91.36% 98.95%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 90.59% 82.69%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.51% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.91% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.26% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.71% 100.00%
CHEMBL2535 P11166 Glucose transporter 85.60% 98.75%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 85.29% 93.03%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.23% 94.00%
CHEMBL1937 Q92769 Histone deacetylase 2 84.79% 94.75%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.93% 92.62%
CHEMBL4630 O14757 Serine/threonine-protein kinase Chk1 81.61% 97.03%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 81.52% 96.77%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 81.16% 91.07%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.89% 89.00%
CHEMBL340 P08684 Cytochrome P450 3A4 80.30% 91.19%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Azadirachta indica

Cross-Links

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PubChem 189704
LOTUS LTS0227035
wikiData Q82897060