Nimbidiol

Details

Top
Internal ID 73379409-554f-4ee1-8588-ef52d744bfeb
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name (4aS,10aS)-6,7-dihydroxy-1,1,4a-trimethyl-3,4,10,10a-tetrahydro-2H-phenanthren-9-one
SMILES (Canonical) CC1(CCCC2(C1CC(=O)C3=CC(=C(C=C32)O)O)C)C
SMILES (Isomeric) C[C@]12CCCC([C@@H]1CC(=O)C3=CC(=C(C=C23)O)O)(C)C
InChI InChI=1S/C17H22O3/c1-16(2)5-4-6-17(3)11-8-14(20)13(19)7-10(11)12(18)9-15(16)17/h7-8,15,19-20H,4-6,9H2,1-3H3/t15-,17+/m0/s1
InChI Key JMBKXUYCBVKSSY-DOTOQJQBSA-N
Popularity 8 references in papers

Physical and Chemical Properties

Top
Molecular Formula C17H22O3
Molecular Weight 274.35 g/mol
Exact Mass 274.15689456 g/mol
Topological Polar Surface Area (TPSA) 57.50 Ų
XlogP 4.10
Atomic LogP (AlogP) 3.77
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 0

Synonyms

Top
CHEMBL202413
(4aS,10aS)-6,7-dihydroxy-1,1,4a-trimethyl-3,4,10,10a-tetrahydro-2H-phenanthren-9-one

2D Structure

Top
2D Structure of Nimbidiol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9967 99.67%
Caco-2 + 0.7649 76.49%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.8885 88.85%
OATP2B1 inhibitior - 0.7156 71.56%
OATP1B1 inhibitior + 0.8931 89.31%
OATP1B3 inhibitior + 0.9764 97.64%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior - 0.9239 92.39%
P-glycoprotein inhibitior - 0.9397 93.97%
P-glycoprotein substrate - 0.9236 92.36%
CYP3A4 substrate + 0.5514 55.14%
CYP2C9 substrate - 0.7212 72.12%
CYP2D6 substrate - 0.7787 77.87%
CYP3A4 inhibition - 0.8084 80.84%
CYP2C9 inhibition - 0.8933 89.33%
CYP2C19 inhibition - 0.8683 86.83%
CYP2D6 inhibition - 0.9432 94.32%
CYP1A2 inhibition + 0.6765 67.65%
CYP2C8 inhibition - 0.8040 80.40%
CYP inhibitory promiscuity - 0.9305 93.05%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8600 86.00%
Carcinogenicity (trinary) Non-required 0.6143 61.43%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.6261 62.61%
Skin irritation - 0.5847 58.47%
Skin corrosion - 0.9360 93.60%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5872 58.72%
Micronuclear - 0.9300 93.00%
Hepatotoxicity - 0.5225 52.25%
skin sensitisation - 0.7370 73.70%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.6570 65.70%
Acute Oral Toxicity (c) III 0.7092 70.92%
Estrogen receptor binding - 0.4858 48.58%
Androgen receptor binding - 0.5378 53.78%
Thyroid receptor binding + 0.6486 64.86%
Glucocorticoid receptor binding + 0.8490 84.90%
Aromatase binding + 0.6941 69.41%
PPAR gamma + 0.7054 70.54%
Honey bee toxicity - 0.7942 79.42%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9951 99.51%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.57% 91.11%
CHEMBL2581 P07339 Cathepsin D 94.43% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.85% 95.56%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 91.10% 82.69%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 86.50% 90.71%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.40% 96.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.18% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.89% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.42% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 82.44% 94.75%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.36% 95.89%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.78% 93.04%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.19% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 80.93% 91.49%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 80.54% 93.40%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.21% 97.09%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Azadirachta indica
Celastrus orbiculatus

Cross-Links

Top
PubChem 11334829
LOTUS LTS0237367
wikiData Q105131241