Neo-gambogic acid

Details

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Internal ID 8b0a4018-079b-4289-9be9-f3352fe376f1
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > Pyranoxanthones
IUPAC Name (E)-4-[10,12-dihydroxy-8,21,21-trimethyl-5-(3-methylbut-2-enyl)-8-(4-methylpent-3-enyl)-14,18-dioxo-3,7,20-trioxahexacyclo[15.4.1.02,15.02,19.04,13.06,11]docosa-4(13),5,11,15-tetraen-19-yl]-2-methylbut-2-enoic acid
SMILES (Canonical) CC(=CCCC1(CC(C2=C(C3=C(C(=C2O1)CC=C(C)C)OC45C6CC(C=C4C3=O)C(=O)C5(OC6(C)C)CC=C(C)C(=O)O)O)O)C)C
SMILES (Isomeric) CC(=CCCC1(CC(C2=C(C3=C(C(=C2O1)CC=C(C)C)OC45C6CC(C=C4C3=O)C(=O)C5(OC6(C)C)C/C=C(\C)/C(=O)O)O)O)C)C
InChI InChI=1S/C38H46O9/c1-19(2)10-9-14-36(8)18-25(39)27-30(41)28-29(40)24-16-22-17-26-35(6,7)47-37(33(22)42,15-13-21(5)34(43)44)38(24,26)46-32(28)23(31(27)45-36)12-11-20(3)4/h10-11,13,16,22,25-26,39,41H,9,12,14-15,17-18H2,1-8H3,(H,43,44)/b21-13+
InChI Key BLDWFKHVHHINGR-FYJGNVAPSA-N
Popularity 71 references in papers

Physical and Chemical Properties

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Molecular Formula C38H46O9
Molecular Weight 646.80 g/mol
Exact Mass 646.31418304 g/mol
Topological Polar Surface Area (TPSA) 140.00 Ų
XlogP 6.30
Atomic LogP (AlogP) 6.65
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 8

Synonyms

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Neo-gambogic acid
93772-31-7
(E)-4-[10,12-dihydroxy-8,21,21-trimethyl-5-(3-methylbut-2-enyl)-8-(4-methylpent-3-enyl)-14,18-dioxo-3,7,20-trioxahexacyclo[15.4.1.02,15.02,19.04,13.06,11]docosa-4(13),5,11,15-tetraen-19-yl]-2-methylbut-2-enoic acid
AKOS040758796
2-Butenoic acid, 4-(3a,4,5,7,10,11-hexahydro-8,9-dihydroxy-3,3,11-trimethyl-13-(3-methyl-2-butenyl)-11-(4-methyl-3-pentenyl)-7,15-dioxo-1,5-methano-1H,3H,9H-furo(3,4-g)pyrano(3,2-b)xanthen-1-yl)-2-methyl-

2D Structure

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2D Structure of Neo-gambogic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9682 96.82%
Caco-2 - 0.8121 81.21%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7446 74.46%
OATP2B1 inhibitior + 0.5649 56.49%
OATP1B1 inhibitior - 0.3450 34.50%
OATP1B3 inhibitior + 0.9662 96.62%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.9873 98.73%
P-glycoprotein inhibitior + 0.8130 81.30%
P-glycoprotein substrate + 0.5902 59.02%
CYP3A4 substrate + 0.7005 70.05%
CYP2C9 substrate - 0.5971 59.71%
CYP2D6 substrate - 0.8619 86.19%
CYP3A4 inhibition - 0.6275 62.75%
CYP2C9 inhibition - 0.7129 71.29%
CYP2C19 inhibition - 0.7897 78.97%
CYP2D6 inhibition - 0.8976 89.76%
CYP1A2 inhibition - 0.6409 64.09%
CYP2C8 inhibition + 0.7776 77.76%
CYP inhibitory promiscuity - 0.7899 78.99%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Danger 0.4701 47.01%
Eye corrosion - 0.9910 99.10%
Eye irritation - 0.9010 90.10%
Skin irritation - 0.5570 55.70%
Skin corrosion - 0.9154 91.54%
Ames mutagenesis + 0.5472 54.72%
Human Ether-a-go-go-Related Gene inhibition - 0.5581 55.81%
Micronuclear - 0.7100 71.00%
Hepatotoxicity - 0.8000 80.00%
skin sensitisation - 0.8263 82.63%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity - 0.8892 88.92%
Acute Oral Toxicity (c) I 0.4889 48.89%
Estrogen receptor binding + 0.8013 80.13%
Androgen receptor binding + 0.7680 76.80%
Thyroid receptor binding + 0.6105 61.05%
Glucocorticoid receptor binding + 0.8539 85.39%
Aromatase binding + 0.7526 75.26%
PPAR gamma + 0.7361 73.61%
Honey bee toxicity - 0.7089 70.89%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9965 99.65%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.24% 91.11%
CHEMBL284 P27487 Dipeptidyl peptidase IV 97.67% 95.69%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.75% 94.45%
CHEMBL2581 P07339 Cathepsin D 95.08% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.63% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 90.21% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.89% 97.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.47% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.93% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 87.60% 96.09%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 86.76% 96.38%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.32% 95.56%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.67% 96.95%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.17% 95.50%
CHEMBL340 P08684 Cytochrome P450 3A4 82.25% 91.19%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 82.14% 96.90%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.92% 100.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.45% 85.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia morella

Cross-Links

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PubChem 6438568
NPASS NPC47123