Narbomycin

Details

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Internal ID 7c9aad8d-f58e-4938-9290-29e006081cd6
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name (3R,5R,6S,7S,9R,11E,13R,14R)-6-[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy-14-ethyl-3,5,7,9,13-pentamethyl-1-oxacyclotetradec-11-ene-2,4,10-trione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H47NO7/c1-10-23-15(2)11-12-22(30)16(3)13-17(4)26(19(6)24(31)20(7)27(33)35-23)36-28-25(32)21(29(8)9)14-18(5)34-28/h11-12,15-21,23,25-26,28,32H,10,13-14H2,1-9H3/b12-11+/t15-,16-,17+,18-,19+,20-,21+,23-,25-,26+,28+/m1/s1
InChI Key OXFYAOOMMKGGAI-JLTOUBQASA-N
Popularity 19 references in papers

Physical and Chemical Properties

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Molecular Formula C28H47NO7
Molecular Weight 509.70 g/mol
Exact Mass 509.33525284 g/mol
Topological Polar Surface Area (TPSA) 102.00 Ų
XlogP 4.40
Atomic LogP (AlogP) 3.40
H-Bond Acceptor 8
H-Bond Donor 1
Rotatable Bonds 4

Synonyms

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12-Deoxypicromycin
6036-25-5
CHEMBL106096
CHEBI:29649
C11998
(3R,5R,6S,7S,9R,11E,13R,14R)-6-[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy-14-ethyl-3,5,7,9,13-pentamethyl-1-oxacyclotetradec-11-ene-2,4,10-trione
024664144V
Picromycin, 12-deoxy-
AC1NQZE9
UNII-024664144V
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Narbomycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8963 89.63%
Caco-2 - 0.7198 71.98%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.4059 40.59%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8854 88.54%
OATP1B3 inhibitior + 0.9194 91.94%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.6271 62.71%
P-glycoprotein inhibitior + 0.6548 65.48%
P-glycoprotein substrate + 0.5904 59.04%
CYP3A4 substrate + 0.6790 67.90%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8586 85.86%
CYP3A4 inhibition - 0.6636 66.36%
CYP2C9 inhibition - 0.9035 90.35%
CYP2C19 inhibition - 0.8714 87.14%
CYP2D6 inhibition - 0.9273 92.73%
CYP1A2 inhibition - 0.8663 86.63%
CYP2C8 inhibition - 0.8725 87.25%
CYP inhibitory promiscuity - 0.9585 95.85%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5305 53.05%
Eye corrosion - 0.9845 98.45%
Eye irritation - 0.9350 93.50%
Skin irritation - 0.7865 78.65%
Skin corrosion - 0.9247 92.47%
Ames mutagenesis - 0.6354 63.54%
Human Ether-a-go-go-Related Gene inhibition - 0.5637 56.37%
Micronuclear - 0.5400 54.00%
Hepatotoxicity + 0.7948 79.48%
skin sensitisation - 0.8935 89.35%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.6881 68.81%
Acute Oral Toxicity (c) III 0.7105 71.05%
Estrogen receptor binding + 0.7335 73.35%
Androgen receptor binding - 0.4874 48.74%
Thyroid receptor binding - 0.4942 49.42%
Glucocorticoid receptor binding + 0.5813 58.13%
Aromatase binding - 0.5326 53.26%
PPAR gamma + 0.5892 58.92%
Honey bee toxicity - 0.6283 62.83%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5900 59.00%
Fish aquatic toxicity - 0.3990 39.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.74% 96.09%
CHEMBL2581 P07339 Cathepsin D 96.65% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.34% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.73% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.21% 89.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 87.65% 96.77%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.61% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 86.02% 94.73%
CHEMBL4208 P20618 Proteasome component C5 84.27% 90.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 83.78% 90.08%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.61% 94.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.82% 96.21%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.42% 94.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.09% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 5282036
LOTUS LTS0177418
wikiData Q27104078