(2S,3R)-3-Chloro-2-((2E)-3,7-dimethyl-2,6-octadien-1-yl)-2,3-dihydro-2,5,7-trihydroxy-3-(3-methyl-2-buten-1-yl)-1,4-naphthalenedione

Details

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Internal ID 9252360c-2bd1-4958-aff2-bcafb2ecd776
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Quinone and hydroquinone lipids > Vitamin K compounds > Menaquinones
IUPAC Name (2S,3R)-3-chloro-2-[(2E)-3,7-dimethylocta-2,6-dienyl]-2,5,7-trihydroxy-3-(3-methylbut-2-enyl)naphthalene-1,4-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H31ClO5/c1-15(2)7-6-8-17(5)10-12-25(31)22(29)19-13-18(27)14-20(28)21(19)23(30)24(25,26)11-9-16(3)4/h7,9-10,13-14,27-28,31H,6,8,11-12H2,1-5H3/b17-10+/t24-,25-/m0/s1
InChI Key DRVVWOVFACYRGZ-GFNWSNCPSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C25H31ClO5
Molecular Weight 447.00 g/mol
Exact Mass 446.1860018 g/mol
Topological Polar Surface Area (TPSA) 94.80 Ų
XlogP 6.50
Atomic LogP (AlogP) 5.62
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 7

Synonyms

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135529-33-8
(2S,3R)-3-chloro-2-[(2E)-3,7-dimethylocta-2,6-dienyl]-2,5,7-trihydroxy-3-(3-methylbut-2-enyl)naphthalene-1,4-dione
CHEMBL4292932
DTXSID001102219
(2S,3R)-3-Chloro-2-[(2E)-3,7-dimethyl-2,6-octadien-1-yl]-2,3-dihydro-2,5,7-trihydroxy-3-(3-methyl-2-buten-1-yl)-1,4-naphthalenedione
1,4-Naphthalenedione, 3-chloro-2-(3,7-dimethyl-2,6-octadienyl)-2,3-dihydro-2,5,7-trihydroxy-3-(3-methyl-2-butenyl)-, (2S-(2alpha,2(E),3beta))-

2D Structure

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2D Structure of (2S,3R)-3-Chloro-2-((2E)-3,7-dimethyl-2,6-octadien-1-yl)-2,3-dihydro-2,5,7-trihydroxy-3-(3-methyl-2-buten-1-yl)-1,4-naphthalenedione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9951 99.51%
Caco-2 - 0.6107 61.07%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.7972 79.72%
OATP2B1 inhibitior - 0.7124 71.24%
OATP1B1 inhibitior + 0.8753 87.53%
OATP1B3 inhibitior + 0.8451 84.51%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.9715 97.15%
P-glycoprotein inhibitior - 0.4289 42.89%
P-glycoprotein substrate - 0.7997 79.97%
CYP3A4 substrate + 0.6171 61.71%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8262 82.62%
CYP3A4 inhibition - 0.7583 75.83%
CYP2C9 inhibition - 0.6194 61.94%
CYP2C19 inhibition - 0.7448 74.48%
CYP2D6 inhibition - 0.8989 89.89%
CYP1A2 inhibition - 0.6807 68.07%
CYP2C8 inhibition + 0.4705 47.05%
CYP inhibitory promiscuity - 0.7108 71.08%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.8749 87.49%
Carcinogenicity (trinary) Non-required 0.6748 67.48%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.8390 83.90%
Skin irritation - 0.6323 63.23%
Skin corrosion - 0.9313 93.13%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6665 66.65%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.5698 56.98%
skin sensitisation - 0.7253 72.53%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity + 0.9019 90.19%
Acute Oral Toxicity (c) III 0.5110 51.10%
Estrogen receptor binding + 0.8010 80.10%
Androgen receptor binding + 0.7454 74.54%
Thyroid receptor binding + 0.6911 69.11%
Glucocorticoid receptor binding + 0.8678 86.78%
Aromatase binding + 0.7426 74.26%
PPAR gamma + 0.8441 84.41%
Honey bee toxicity - 0.7778 77.78%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity + 0.5900 59.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.25% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.50% 98.95%
CHEMBL1929 P47989 Xanthine dehydrogenase 95.25% 96.12%
CHEMBL4208 P20618 Proteasome component C5 94.29% 90.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.76% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 89.18% 94.73%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 87.99% 89.34%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.50% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.43% 96.09%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 85.78% 93.40%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 85.65% 92.08%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.08% 89.00%
CHEMBL1937 Q92769 Histone deacetylase 2 84.05% 94.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.25% 95.56%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 82.54% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 6444022
LOTUS LTS0271322
wikiData Q104987671