Namalide D

Details

Top
Internal ID d67bc48d-ef0f-4d79-a86e-00ecc772d57c
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Cyclic peptides
IUPAC Name 2-[[6-butan-2-yl-2,5,8-trioxo-3-(2-phenylethyl)-1,4,7-triazacyclotridec-9-yl]carbamoylamino]-3-methylpentanoic acid
SMILES (Canonical) CCC(C)C1C(=O)NC(C(=O)NCCCCC(C(=O)N1)NC(=O)NC(C(C)CC)C(=O)O)CCC2=CC=CC=C2
SMILES (Isomeric) CCC(C)C1C(=O)NC(C(=O)NCCCCC(C(=O)N1)NC(=O)NC(C(C)CC)C(=O)O)CCC2=CC=CC=C2
InChI InChI=1S/C29H45N5O6/c1-5-18(3)23-27(37)31-22(16-15-20-12-8-7-9-13-20)25(35)30-17-11-10-14-21(26(36)33-23)32-29(40)34-24(28(38)39)19(4)6-2/h7-9,12-13,18-19,21-24H,5-6,10-11,14-17H2,1-4H3,(H,30,35)(H,31,37)(H,33,36)(H,38,39)(H2,32,34,40)
InChI Key YLSOIPHOXMRWGW-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C29H45N5O6
Molecular Weight 559.70 g/mol
Exact Mass 559.33698417 g/mol
Topological Polar Surface Area (TPSA) 166.00 Ų
XlogP 3.70
Atomic LogP (AlogP) 2.10
H-Bond Acceptor 5
H-Bond Donor 6
Rotatable Bonds 10

Synonyms

Top
DTXSID601333892

2D Structure

Top
2D Structure of Namalide D

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9043 90.43%
Caco-2 - 0.8655 86.55%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.7007 70.07%
OATP2B1 inhibitior - 0.7136 71.36%
OATP1B1 inhibitior + 0.8584 85.84%
OATP1B3 inhibitior + 0.9365 93.65%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.8611 86.11%
P-glycoprotein inhibitior + 0.7044 70.44%
P-glycoprotein substrate + 0.7808 78.08%
CYP3A4 substrate + 0.6320 63.20%
CYP2C9 substrate + 0.6092 60.92%
CYP2D6 substrate - 0.8681 86.81%
CYP3A4 inhibition - 0.7414 74.14%
CYP2C9 inhibition - 0.8510 85.10%
CYP2C19 inhibition - 0.7796 77.96%
CYP2D6 inhibition - 0.9376 93.76%
CYP1A2 inhibition - 0.9177 91.77%
CYP2C8 inhibition + 0.4604 46.04%
CYP inhibitory promiscuity - 0.9516 95.16%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8500 85.00%
Carcinogenicity (trinary) Non-required 0.6931 69.31%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9519 95.19%
Skin irritation - 0.7861 78.61%
Skin corrosion - 0.9484 94.84%
Ames mutagenesis - 0.7400 74.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5350 53.50%
Micronuclear + 0.7300 73.00%
Hepatotoxicity + 0.5708 57.08%
skin sensitisation - 0.8893 88.93%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity - 0.6587 65.87%
Acute Oral Toxicity (c) III 0.6291 62.91%
Estrogen receptor binding + 0.7037 70.37%
Androgen receptor binding + 0.6430 64.30%
Thyroid receptor binding + 0.5226 52.26%
Glucocorticoid receptor binding + 0.6047 60.47%
Aromatase binding + 0.5368 53.68%
PPAR gamma + 0.6649 66.49%
Honey bee toxicity - 0.8686 86.86%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.8903 89.03%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.64% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.17% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 94.00% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.23% 97.09%
CHEMBL221 P23219 Cyclooxygenase-1 91.44% 90.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.39% 91.11%
CHEMBL3359 P21462 Formyl peptide receptor 1 89.96% 93.56%
CHEMBL3202 P48147 Prolyl endopeptidase 88.38% 90.65%
CHEMBL268 P43235 Cathepsin K 87.80% 96.85%
CHEMBL220 P22303 Acetylcholinesterase 87.22% 94.45%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 87.19% 94.62%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.83% 94.45%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 86.34% 93.03%
CHEMBL4072 P07858 Cathepsin B 86.00% 93.67%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 85.70% 97.64%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 85.69% 92.67%
CHEMBL4979 P13866 Sodium/glucose cotransporter 1 82.04% 98.24%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.41% 97.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.34% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.19% 95.56%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.15% 90.71%
CHEMBL2492 P36544 Neuronal acetylcholine receptor protein alpha-7 subunit 81.12% 88.42%
CHEMBL2535 P11166 Glucose transporter 80.94% 98.75%
CHEMBL5103 Q969S8 Histone deacetylase 10 80.76% 90.08%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.00% 93.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 146683660
LOTUS LTS0106989
wikiData Q105350284