Namalide C

Details

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Internal ID 18423e26-4050-4a8f-b444-32819381bc10
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Cyclic peptides
IUPAC Name (2S,3R)-2-[[(3S,6S,9R)-3-[2-(4-hydroxyphenyl)ethyl]-2,5,8-trioxo-6-propan-2-yl-1,4,7-triazacyclotridec-9-yl]carbamoylamino]-3-methylpentanoic acid
SMILES (Canonical) CCC(C)C(C(=O)O)NC(=O)NC1CCCCNC(=O)C(NC(=O)C(NC1=O)C(C)C)CCC2=CC=C(C=C2)O
SMILES (Isomeric) CC[C@@H](C)[C@@H](C(=O)O)NC(=O)N[C@@H]1CCCCNC(=O)[C@@H](NC(=O)[C@@H](NC1=O)C(C)C)CCC2=CC=C(C=C2)O
InChI InChI=1S/C28H43N5O7/c1-5-17(4)23(27(38)39)33-28(40)31-20-8-6-7-15-29-24(35)21(14-11-18-9-12-19(34)13-10-18)30-26(37)22(16(2)3)32-25(20)36/h9-10,12-13,16-17,20-23,34H,5-8,11,14-15H2,1-4H3,(H,29,35)(H,30,37)(H,32,36)(H,38,39)(H2,31,33,40)/t17-,20-,21+,22+,23+/m1/s1
InChI Key VYCMKIJKBUVUBL-KJWUJUMESA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C28H43N5O7
Molecular Weight 561.70 g/mol
Exact Mass 561.31624873 g/mol
Topological Polar Surface Area (TPSA) 186.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 1.42
H-Bond Acceptor 6
H-Bond Donor 7
Rotatable Bonds 9

Synonyms

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CHEMBL4159803
CHEBI:189347
BDBM50277995
(2S,3R)-2-[[(3S,6S,9R)-3-[2-(4-hydroxyphenyl)ethyl]-2,5,8-trioxo-6-propan-2-yl-1,4,7-triazacyclotridec-9-yl]carbamoylamino]-3-methylpentanoic acid

2D Structure

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2D Structure of Namalide C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9554 95.54%
Caco-2 - 0.8656 86.56%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.7531 75.31%
OATP2B1 inhibitior - 0.5720 57.20%
OATP1B1 inhibitior + 0.8336 83.36%
OATP1B3 inhibitior + 0.9325 93.25%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.7772 77.72%
P-glycoprotein inhibitior + 0.6601 66.01%
P-glycoprotein substrate + 0.8213 82.13%
CYP3A4 substrate + 0.6342 63.42%
CYP2C9 substrate + 0.6075 60.75%
CYP2D6 substrate - 0.8531 85.31%
CYP3A4 inhibition - 0.6195 61.95%
CYP2C9 inhibition - 0.8098 80.98%
CYP2C19 inhibition - 0.6854 68.54%
CYP2D6 inhibition - 0.9143 91.43%
CYP1A2 inhibition - 0.8844 88.44%
CYP2C8 inhibition + 0.6168 61.68%
CYP inhibitory promiscuity - 0.8852 88.52%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8400 84.00%
Carcinogenicity (trinary) Non-required 0.6847 68.47%
Eye corrosion - 0.9883 98.83%
Eye irritation - 0.9462 94.62%
Skin irritation - 0.7864 78.64%
Skin corrosion - 0.9393 93.93%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6303 63.03%
Micronuclear + 0.7500 75.00%
Hepatotoxicity + 0.6125 61.25%
skin sensitisation - 0.8794 87.94%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity - 0.8131 81.31%
Acute Oral Toxicity (c) III 0.6416 64.16%
Estrogen receptor binding + 0.7286 72.86%
Androgen receptor binding + 0.7190 71.90%
Thyroid receptor binding + 0.5487 54.87%
Glucocorticoid receptor binding + 0.5936 59.36%
Aromatase binding + 0.5863 58.63%
PPAR gamma + 0.6192 61.92%
Honey bee toxicity - 0.8750 87.50%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.9140 91.40%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.64% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.46% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.37% 94.45%
CHEMBL268 P43235 Cathepsin K 95.95% 96.85%
CHEMBL226 P30542 Adenosine A1 receptor 95.38% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.86% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.06% 91.11%
CHEMBL3359 P21462 Formyl peptide receptor 1 91.67% 93.56%
CHEMBL5103 Q969S8 Histone deacetylase 10 91.17% 90.08%
CHEMBL3437 Q16853 Amine oxidase, copper containing 90.65% 94.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 88.75% 90.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.36% 95.89%
CHEMBL4072 P07858 Cathepsin B 87.88% 93.67%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 87.48% 100.00%
CHEMBL2514 O95665 Neurotensin receptor 2 85.02% 100.00%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 84.58% 97.23%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 83.30% 94.62%
CHEMBL3202 P48147 Prolyl endopeptidase 82.74% 90.65%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.62% 99.17%
CHEMBL5203 P33316 dUTP pyrophosphatase 81.48% 99.18%
CHEMBL1075317 P61964 WD repeat-containing protein 5 81.05% 96.33%
CHEMBL220 P22303 Acetylcholinesterase 80.80% 94.45%
CHEMBL2535 P11166 Glucose transporter 80.54% 98.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139589786
LOTUS LTS0182604
wikiData Q105298887