Nagilactoside C

Details

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Internal ID 43739f2c-c0e6-4f7a-8066-ffa3baa7c6c2
Taxonomy Organoheterocyclic compounds > Naphthopyrans
IUPAC Name (1S,8R,9S,12S,14R,16R)-14-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-8-hydroxy-1,12-dimethyl-6-propan-2-yl-5,10-dioxatetracyclo[7.6.1.02,7.012,16]hexadeca-2,6-diene-4,11-dione
SMILES (Canonical) CC(C)C1=C2C(C3C4C(C2=CC(=O)O1)(CC(CC4(C(=O)O3)C)OC5C(C(C(C(O5)CO)O)OC6C(C(C(C(O6)CO)O)O)O)O)C)O
SMILES (Isomeric) CC(C)C1=C2[C@H]([C@@H]3[C@@H]4[C@@](C2=CC(=O)O1)(C[C@H](C[C@@]4(C(=O)O3)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)C)O
InChI InChI=1S/C31H44O16/c1-10(2)23-16-12(5-15(34)45-23)30(3)6-11(7-31(4)26(30)25(19(16)37)47-29(31)41)42-28-22(40)24(18(36)14(9-33)44-28)46-27-21(39)20(38)17(35)13(8-32)43-27/h5,10-11,13-14,17-22,24-28,32-33,35-40H,6-9H2,1-4H3/t11-,13-,14-,17-,18-,19-,20+,21-,22-,24+,25-,26-,27+,28-,30-,31+/m1/s1
InChI Key YKQPHEVALKDZRP-OWHFWFFCSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C31H44O16
Molecular Weight 672.70 g/mol
Exact Mass 672.26293531 g/mol
Topological Polar Surface Area (TPSA) 251.00 Ų
XlogP -2.50
Atomic LogP (AlogP) -2.58
H-Bond Acceptor 16
H-Bond Donor 8
Rotatable Bonds 7

Synonyms

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(1S,8R,9S,12S,14R,16R)-14-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-8-hydroxy-1,12-dimethyl-6-propan-2-yl-5,10-dioxatetracyclo[7.6.1.02,7.012,16]hexadeca-2,6-diene-4,11-dione

2D Structure

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2D Structure of Nagilactoside C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5983 59.83%
Caco-2 - 0.8813 88.13%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.7444 74.44%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8760 87.60%
OATP1B3 inhibitior + 0.9059 90.59%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.4809 48.09%
P-glycoprotein inhibitior + 0.6115 61.15%
P-glycoprotein substrate - 0.5783 57.83%
CYP3A4 substrate + 0.6515 65.15%
CYP2C9 substrate - 0.6086 60.86%
CYP2D6 substrate - 0.8673 86.73%
CYP3A4 inhibition - 0.8686 86.86%
CYP2C9 inhibition - 0.7728 77.28%
CYP2C19 inhibition - 0.7769 77.69%
CYP2D6 inhibition - 0.9460 94.60%
CYP1A2 inhibition - 0.7327 73.27%
CYP2C8 inhibition - 0.6256 62.56%
CYP inhibitory promiscuity - 0.8202 82.02%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5820 58.20%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9228 92.28%
Skin irritation - 0.8197 81.97%
Skin corrosion - 0.9460 94.60%
Ames mutagenesis - 0.5992 59.92%
Human Ether-a-go-go-Related Gene inhibition - 0.5392 53.92%
Micronuclear - 0.6241 62.41%
Hepatotoxicity - 0.6446 64.46%
skin sensitisation - 0.8770 87.70%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity - 0.6035 60.35%
Acute Oral Toxicity (c) III 0.5354 53.54%
Estrogen receptor binding + 0.7747 77.47%
Androgen receptor binding + 0.7248 72.48%
Thyroid receptor binding - 0.5475 54.75%
Glucocorticoid receptor binding + 0.5875 58.75%
Aromatase binding + 0.6441 64.41%
PPAR gamma + 0.7029 70.29%
Honey bee toxicity - 0.6673 66.73%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.9535 95.35%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.06% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.17% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.98% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.23% 89.00%
CHEMBL2581 P07339 Cathepsin D 89.18% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.14% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.68% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.57% 95.56%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 85.90% 95.71%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.64% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.58% 95.89%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.31% 99.17%
CHEMBL226 P30542 Adenosine A1 receptor 84.16% 95.93%
CHEMBL3401 O75469 Pregnane X receptor 84.10% 94.73%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.89% 97.25%
CHEMBL5255 O00206 Toll-like receptor 4 81.61% 92.50%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 81.37% 91.07%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.04% 100.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.15% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Nageia nagi

Cross-Links

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PubChem 10394719
LOTUS LTS0272894
wikiData Q105349849