N-Hydroxymethyllatrunculin B

Details

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Internal ID c1d1da16-d248-45f3-87ae-df0adfbf6cb0
Taxonomy Phenylpropanoids and polyketides > Macrolides and analogues
IUPAC Name (4R)-4-[(1R,4Z,8Z,10S,13R,15R)-15-hydroxy-5,10-dimethyl-3-oxo-2,14-dioxabicyclo[11.3.1]heptadeca-4,8-dien-15-yl]-3-(hydroxymethyl)-1,3-thiazolidin-2-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H31NO6S/c1-14-5-3-4-6-15(2)9-19(24)27-17-10-16(8-7-14)28-21(26,11-17)18-12-29-20(25)22(18)13-23/h3,5,9,14,16-18,23,26H,4,6-8,10-13H2,1-2H3/b5-3-,15-9-/t14-,16-,17-,18+,21-/m1/s1
InChI Key OFLWPNGXBLYXIX-LDYNUQMTSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C21H31NO6S
Molecular Weight 425.50 g/mol
Exact Mass 425.18720888 g/mol
Topological Polar Surface Area (TPSA) 122.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 2.97
H-Bond Acceptor 7
H-Bond Donor 2
Rotatable Bonds 2

Synonyms

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(4R)-4-((1R,4S,5Z,9Z,13R,15R)-15-hydroxy-4,9-dimethyl-11-oxo-12,16-dioxabicyclo(11.3.1)heptadeca-5,9-dien-15-yl)-3-(hydroxymethyl)-1,3-thiazolidin-2-one
(4R)-4-[(1R,4S,5Z,9Z,13R,15R)-15-hydroxy-4,9-dimethyl-11-oxo-12,16-dioxabicyclo[11.3.1]heptadeca-5,9-dien-15-yl]-3-(hydroxymethyl)-1,3-thiazolidin-2-one
RefChem:163549
CHEMBL491355
(4R)-4-[(1R,4Z,8Z,10S,13R,15R)-15-Hydroxy-5,10-dimethyl-3-oxo-2,14-dioxabicyclo[11.3.1]heptadeca-4,8-dien-15-yl]-3-(hydroxymethyl)-1,3-thiazolidin-2-one
(4R)-4-[(1R,4S,5Z,9Z,13R,15R)-15-hydroxy-4,9-dimethyl-11-oxo-12,16-dioxabicyclo[11.3.1]heptadeca-5,9-dien-15-yl]-3-(hydroxymethyl)thiazolidin-2-one

2D Structure

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2D Structure of N-Hydroxymethyllatrunculin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8845 88.45%
Caco-2 - 0.6323 63.23%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.5407 54.07%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9038 90.38%
OATP1B3 inhibitior + 0.9397 93.97%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9575 95.75%
P-glycoprotein inhibitior - 0.6005 60.05%
P-glycoprotein substrate + 0.5574 55.74%
CYP3A4 substrate + 0.6471 64.71%
CYP2C9 substrate - 0.5998 59.98%
CYP2D6 substrate - 0.8822 88.22%
CYP3A4 inhibition - 0.5294 52.94%
CYP2C9 inhibition - 0.8050 80.50%
CYP2C19 inhibition - 0.6932 69.32%
CYP2D6 inhibition - 0.9089 90.89%
CYP1A2 inhibition - 0.6938 69.38%
CYP2C8 inhibition - 0.6128 61.28%
CYP inhibitory promiscuity - 0.7397 73.97%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.4787 47.87%
Eye corrosion - 0.9834 98.34%
Eye irritation - 0.9917 99.17%
Skin irritation - 0.7491 74.91%
Skin corrosion - 0.9098 90.98%
Ames mutagenesis - 0.6270 62.70%
Human Ether-a-go-go-Related Gene inhibition + 0.6814 68.14%
Micronuclear + 0.6000 60.00%
Hepatotoxicity + 0.6658 66.58%
skin sensitisation - 0.8473 84.73%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.7401 74.01%
Acute Oral Toxicity (c) III 0.5700 57.00%
Estrogen receptor binding + 0.8368 83.68%
Androgen receptor binding + 0.6399 63.99%
Thyroid receptor binding + 0.5306 53.06%
Glucocorticoid receptor binding + 0.7452 74.52%
Aromatase binding + 0.5560 55.60%
PPAR gamma + 0.6368 63.68%
Honey bee toxicity - 0.8276 82.76%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9366 93.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.68% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.80% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.41% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.29% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.30% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.05% 97.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.58% 99.23%
CHEMBL230 P35354 Cyclooxygenase-2 89.56% 89.63%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.18% 89.00%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 84.56% 98.46%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.66% 86.33%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.83% 97.14%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 81.60% 93.40%
CHEMBL2581 P07339 Cathepsin D 81.39% 98.95%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 80.61% 85.11%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 15954252
LOTUS LTS0158488
wikiData Q105191224