N-acetyl-streptothricin D acid

Details

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Internal ID 447e8816-7aab-44a4-855a-25ab1fbd24e0
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Glycosylamines
IUPAC Name (4S,5S)-2-[[3-[[3-acetamido-6-[[3-amino-6-(3,6-diaminohexanoylamino)hexanoyl]amino]hexanoyl]amino]-5-carbamoyloxy-4-hydroxy-6-(hydroxymethyl)oxan-2-yl]amino]-5-[(1R)-2-amino-1-hydroxyethyl]-4,5-dihydro-1H-imidazole-4-carboxylic acid
SMILES (Canonical) CC(=O)NC(CCCNC(=O)CC(CCCNC(=O)CC(CCCN)N)N)CC(=O)NC1C(C(C(OC1NC2=NC(C(N2)C(CN)O)C(=O)O)CO)OC(=O)N)O
SMILES (Isomeric) CC(=O)NC(CCCNC(=O)CC(CCCNC(=O)CC(CCCN)N)N)CC(=O)NC1C(C(C(OC1NC2=N[C@@H]([C@H](N2)[C@@H](CN)O)C(=O)O)CO)OC(=O)N)O
InChI InChI=1S/C33H62N12O12/c1-16(47)41-19(7-4-10-40-23(50)12-18(37)6-3-9-39-22(49)11-17(36)5-2-8-34)13-24(51)42-27-28(52)29(57-32(38)55)21(15-46)56-30(27)45-33-43-25(20(48)14-35)26(44-33)31(53)54/h17-21,25-30,46,48,52H,2-15,34-37H2,1H3,(H2,38,55)(H,39,49)(H,40,50)(H,41,47)(H,42,51)(H,53,54)(H2,43,44,45)/t17?,18?,19?,20-,21?,25-,26+,27?,28?,29?,30?/m1/s1
InChI Key JAVLRUXTMWRPQN-DZQBZNCESA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C33H62N12O12
Molecular Weight 818.90 g/mol
Exact Mass 818.46101546 g/mol
Topological Polar Surface Area (TPSA) 416.00 Ų
XlogP -10.30
Atomic LogP (AlogP) -6.44
H-Bond Acceptor 18
H-Bond Donor 15
Rotatable Bonds 25

Synonyms

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(4S,5S)-2-[[3-[[3-acetamido-6-[[3-amino-6-(3,6-diaminohexanoylamino)hexanoyl]amino]hexanoyl]amino]-5-carbamoyloxy-4-hydroxy-6-(hydroxymethyl)oxan-2-yl]amino]-5-[(1R)-2-amino-1-hydroxyethyl]-4,5-dihydro-1H-imidazole-4-carboxylic acid
(4S,5S)-2-((3-((3-acetamido-6-((3-amino-6-(3,6-diaminohexanoylamino)hexanoyl)amino)hexanoyl)amino)-5-carbamoyloxy-4-hydroxy-6-(hydroxymethyl)oxan-2-yl)amino)-5-((1R)-2-amino-1-hydroxyethyl)-4,5-dihydro-1H-imidazole-4-carboxylic acid
(4S,5S)-4-((1R)-2-Amino-1-hydroxyethyl)-2-((3-((6-((3-amino-6-((3,6-diamino-1-hydroxyhexylidene)amino)-1-hydroxyhexylidene)amino)-1-hydroxy-3-((1-hydroxyethylidene)amino)hexylidene)amino)-4-hydroxy-5-(C-hydroxycarbonimidoyloxy)-6-(hydroxymethyl)oxan-2-yl)amino)-4,5-dihydro-1H-imidazole-5-carboxylate
(4S,5S)-4-[(1R)-2-Amino-1-hydroxyethyl]-2-[(3-{[6-({3-amino-6-[(3,6-diamino-1-hydroxyhexylidene)amino]-1-hydroxyhexylidene}amino)-1-hydroxy-3-[(1-hydroxyethylidene)amino]hexylidene]amino}-4-hydroxy-5-(C-hydroxycarbonimidoyloxy)-6-(hydroxymethyl)oxan-2-yl)amino]-4,5-dihydro-1H-imidazole-5-carboxylate
RefChem:162671
CHEBI:224740

2D Structure

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2D Structure of N-acetyl-streptothricin D acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7768 77.68%
Caco-2 - 0.8614 86.14%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.5219 52.19%
OATP2B1 inhibitior - 0.7205 72.05%
OATP1B1 inhibitior + 0.8405 84.05%
OATP1B3 inhibitior + 0.9417 94.17%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.6456 64.56%
P-glycoprotein inhibitior + 0.7361 73.61%
P-glycoprotein substrate + 0.7993 79.93%
CYP3A4 substrate + 0.7109 71.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8283 82.83%
CYP3A4 inhibition - 0.9769 97.69%
CYP2C9 inhibition - 0.9175 91.75%
CYP2C19 inhibition - 0.9107 91.07%
CYP2D6 inhibition - 0.9243 92.43%
CYP1A2 inhibition - 0.8872 88.72%
CYP2C8 inhibition + 0.6330 63.30%
CYP inhibitory promiscuity - 0.9873 98.73%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.6138 61.38%
Eye corrosion - 0.9849 98.49%
Eye irritation - 0.9010 90.10%
Skin irritation - 0.7610 76.10%
Skin corrosion - 0.9222 92.22%
Ames mutagenesis - 0.6134 61.34%
Human Ether-a-go-go-Related Gene inhibition - 0.4475 44.75%
Micronuclear + 0.8200 82.00%
Hepatotoxicity - 0.7496 74.96%
skin sensitisation - 0.8165 81.65%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity + 0.5829 58.29%
Acute Oral Toxicity (c) III 0.5513 55.13%
Estrogen receptor binding + 0.7805 78.05%
Androgen receptor binding + 0.6784 67.84%
Thyroid receptor binding + 0.5166 51.66%
Glucocorticoid receptor binding + 0.5910 59.10%
Aromatase binding + 0.6754 67.54%
PPAR gamma + 0.7075 70.75%
Honey bee toxicity - 0.6967 69.67%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity - 0.8384 83.84%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 99.90% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.49% 96.09%
CHEMBL2581 P07339 Cathepsin D 97.59% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.34% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 96.46% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.15% 94.45%
CHEMBL2094135 Q96BI3 Gamma-secretase 94.13% 98.05%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 93.95% 96.21%
CHEMBL4816 Q9Y243 Serine/threonine-protein kinase AKT3 92.02% 96.28%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 91.07% 97.21%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 90.90% 85.00%
CHEMBL2413 P32246 C-C chemokine receptor type 1 89.31% 89.50%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 88.84% 96.90%
CHEMBL2514 O95665 Neurotensin receptor 2 88.43% 100.00%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 88.25% 82.86%
CHEMBL2996 Q05655 Protein kinase C delta 87.23% 97.79%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.93% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 86.91% 94.73%
CHEMBL3776 Q14790 Caspase-8 86.72% 97.06%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.71% 97.09%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 86.20% 98.33%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 84.25% 93.10%
CHEMBL340 P08684 Cytochrome P450 3A4 83.52% 91.19%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.38% 99.23%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.17% 95.50%
CHEMBL1255126 O15151 Protein Mdm4 83.06% 90.20%
CHEMBL5028 O14672 ADAM10 82.98% 97.50%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.48% 94.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.36% 100.00%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 82.19% 92.32%
CHEMBL4581 P52732 Kinesin-like protein 1 82.13% 93.18%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.76% 96.00%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 81.50% 95.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 80.53% 97.29%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139587796
LOTUS LTS0055097
wikiData Q77574284