Myricetin 3'-rhamnoside

Details

Top
Internal ID 55f01380-695b-4b6c-b767-6e7315ba9a28
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides
IUPAC Name 2-[3,4-dihydroxy-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyphenyl]-3,5,7-trihydroxychromen-4-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2=CC(=CC(=C2O)O)C3=C(C(=O)C4=C(C=C(C=C4O3)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)OC2=CC(=CC(=C2O)O)C3=C(C(=O)C4=C(C=C(C=C4O3)O)O)O)O)O)O
InChI InChI=1S/C21H20O12/c1-6-14(25)17(28)19(30)21(31-6)33-12-3-7(2-10(24)15(12)26)20-18(29)16(27)13-9(23)4-8(22)5-11(13)32-20/h2-6,14,17,19,21-26,28-30H,1H3/t6-,14-,17+,19+,21-/m0/s1
InChI Key KPKDFSLIRPVPJF-YDOQJWOYSA-N
Popularity 16 references in papers

Physical and Chemical Properties

Top
Molecular Formula C21H20O12
Molecular Weight 464.40 g/mol
Exact Mass 464.09547607 g/mol
Topological Polar Surface Area (TPSA) 207.00 Ų
XlogP 0.50
Atomic LogP (AlogP) 0.19
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 3

Synonyms

Top
Myricetin-3-O-rhamnoside
38537-01-8
4H-1-Benzopyran-4-one, 2-(3-((6-deoxy-alpha-L-mannopyranosyl)oxy)-4,5-dihydroxyphenyl)-3,5,7-trihydroxy-
DTXSID40191865

2D Structure

Top
2D Structure of Myricetin 3'-rhamnoside

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8357 83.57%
Caco-2 - 0.8916 89.16%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7163 71.63%
OATP2B1 inhibitior + 0.5969 59.69%
OATP1B1 inhibitior + 0.8613 86.13%
OATP1B3 inhibitior + 0.9188 91.88%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.5986 59.86%
P-glycoprotein inhibitior - 0.6635 66.35%
P-glycoprotein substrate - 0.5062 50.62%
CYP3A4 substrate + 0.6203 62.03%
CYP2C9 substrate - 0.7038 70.38%
CYP2D6 substrate - 0.8611 86.11%
CYP3A4 inhibition - 0.7109 71.09%
CYP2C9 inhibition - 0.8538 85.38%
CYP2C19 inhibition - 0.8339 83.39%
CYP2D6 inhibition - 0.9547 95.47%
CYP1A2 inhibition - 0.5306 53.06%
CYP2C8 inhibition + 0.8609 86.09%
CYP inhibitory promiscuity - 0.5648 56.48%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6170 61.70%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.8397 83.97%
Skin irritation - 0.6220 62.20%
Skin corrosion - 0.9360 93.60%
Ames mutagenesis - 0.5437 54.37%
Human Ether-a-go-go-Related Gene inhibition - 0.6367 63.67%
Micronuclear + 0.9100 91.00%
Hepatotoxicity - 0.6000 60.00%
skin sensitisation - 0.8874 88.74%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.7333 73.33%
Mitochondrial toxicity + 0.6250 62.50%
Nephrotoxicity - 0.7639 76.39%
Acute Oral Toxicity (c) III 0.5184 51.84%
Estrogen receptor binding + 0.8157 81.57%
Androgen receptor binding + 0.5815 58.15%
Thyroid receptor binding + 0.6009 60.09%
Glucocorticoid receptor binding + 0.8035 80.35%
Aromatase binding + 0.5629 56.29%
PPAR gamma + 0.7497 74.97%
Honey bee toxicity - 0.8209 82.09%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5301 53.01%
Fish aquatic toxicity + 0.9457 94.57%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.14% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 98.19% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 96.64% 91.49%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.29% 94.00%
CHEMBL2581 P07339 Cathepsin D 95.24% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.93% 86.33%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 93.60% 95.64%
CHEMBL3714130 P46095 G-protein coupled receptor 6 93.03% 97.36%
CHEMBL3194 P02766 Transthyretin 92.65% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 92.17% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.82% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.44% 99.17%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 88.32% 90.71%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.70% 96.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 85.48% 92.94%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.46% 99.23%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 84.97% 95.78%
CHEMBL2424 Q04760 Glyoxalase I 84.66% 91.67%
CHEMBL3038469 P24941 CDK2/Cyclin A 82.72% 91.38%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Nymphaea lotus

Cross-Links

Top
PubChem 56843093
LOTUS LTS0050494
wikiData Q83064452