Micropeptin 88-N

Details

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Internal ID 05b323b1-a796-4e47-957d-5f87ee814c0c
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name (2S)-5-[[(2S,5S,8S,11R,12S,15S,18S,21R)-5-benzyl-8-[(2S)-butan-2-yl]-21-hydroxy-15-[(4-hydroxyphenyl)methyl]-4,11-dimethyl-3,6,9,13,16,22-hexaoxo-2-propan-2-yl-10-oxa-1,4,7,14,17-pentazabicyclo[16.3.1]docosan-12-yl]amino]-2-[[(2S)-2-(butanoylamino)-4-methylpentanoyl]amino]-5-oxopentanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C54H78N8O14/c1-10-15-41(64)55-38(26-29(3)4)47(67)57-37(53(73)74)22-24-42(65)59-45-32(8)76-54(75)44(31(7)11-2)60-49(69)40(28-33-16-13-12-14-17-33)61(9)52(72)46(30(5)6)62-43(66)25-23-36(51(62)71)56-48(68)39(58-50(45)70)27-34-18-20-35(63)21-19-34/h12-14,16-21,29-32,36-40,43-46,63,66H,10-11,15,22-28H2,1-9H3,(H,55,64)(H,56,68)(H,57,67)(H,58,70)(H,59,65)(H,60,69)(H,73,74)/t31-,32+,36-,37-,38-,39-,40-,43+,44-,45-,46-/m0/s1
InChI Key PUNPCZIPNYKTCV-KCWGXPJZSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C54H78N8O14
Molecular Weight 1063.20 g/mol
Exact Mass 1062.56374919 g/mol
Topological Polar Surface Area (TPSA) 319.00 Ų
XlogP 4.60
Atomic LogP (AlogP) 1.58
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 19

Synonyms

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(2S)-5-[[(2S,5S,8S,11R,12S,15S,18S,21R)-5-Benzyl-8-[(2S)-butan-2-yl]-21-hydroxy-15-[(4-hydroxyphenyl)methyl]-4,11-dimethyl-3,6,9,13,16,22-hexaoxo-2-propan-2-yl-10-oxa-1,4,7,14,17-pentazabicyclo[16.3.1]docosan-12-yl]amino]-2-[[(2S)-2-(butanoylamino)-4-methylpentanoyl]amino]-5-oxopentanoic acid
(2S)-5-(((2S,5S,8S,11R,12S,15S,18S,21R)-5-benzyl-8-((2S)-butan-2-yl)-21-hydroxy-15-((4-hydroxyphenyl)methyl)-4,11-dimethyl-3,6,9,13,16,22-hexaoxo-2-propan-2-yl-10-oxa-1,4,7,14,17-pentazabicyclo(16.3.1)docosan-12-yl)amino)-2-(((2S)-2-(butanoylamino)-4-methylpentanoyl)amino)-5-oxopentanoic acid
RefChem:925870
844636-94-8
Micripeptin 88-N
CHEBI:215843

2D Structure

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2D Structure of Micropeptin 88-N

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5117 51.17%
Caco-2 - 0.8691 86.91%
Blood Brain Barrier - 0.9500 95.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.4466 44.66%
OATP2B1 inhibitior - 0.8569 85.69%
OATP1B1 inhibitior + 0.7900 79.00%
OATP1B3 inhibitior + 0.9160 91.60%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8390 83.90%
BSEP inhibitior + 0.9091 90.91%
P-glycoprotein inhibitior + 0.7433 74.33%
P-glycoprotein substrate + 0.8884 88.84%
CYP3A4 substrate + 0.7407 74.07%
CYP2C9 substrate - 0.5997 59.97%
CYP2D6 substrate - 0.8602 86.02%
CYP3A4 inhibition - 0.6482 64.82%
CYP2C9 inhibition - 0.8882 88.82%
CYP2C19 inhibition - 0.8206 82.06%
CYP2D6 inhibition - 0.8633 86.33%
CYP1A2 inhibition - 0.9226 92.26%
CYP2C8 inhibition + 0.7929 79.29%
CYP inhibitory promiscuity - 0.9626 96.26%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.6361 63.61%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.9004 90.04%
Skin irritation - 0.7948 79.48%
Skin corrosion - 0.9300 93.00%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6713 67.13%
Micronuclear + 0.9100 91.00%
Hepatotoxicity - 0.5625 56.25%
skin sensitisation - 0.8948 89.48%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity - 0.7486 74.86%
Acute Oral Toxicity (c) III 0.6692 66.92%
Estrogen receptor binding + 0.8148 81.48%
Androgen receptor binding + 0.6946 69.46%
Thyroid receptor binding + 0.6051 60.51%
Glucocorticoid receptor binding + 0.6100 61.00%
Aromatase binding + 0.5930 59.30%
PPAR gamma + 0.8133 81.33%
Honey bee toxicity - 0.6973 69.73%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9098 90.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.98% 98.95%
CHEMBL3837 P07711 Cathepsin L 99.45% 96.61%
CHEMBL3060 Q9Y345 Glycine transporter 2 97.56% 99.17%
CHEMBL4072 P07858 Cathepsin B 97.34% 93.67%
CHEMBL3359 P21462 Formyl peptide receptor 1 97.17% 93.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.50% 96.09%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 96.12% 93.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.37% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.92% 91.11%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 94.53% 97.14%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 94.40% 97.64%
CHEMBL5103 Q969S8 Histone deacetylase 10 94.25% 90.08%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 93.50% 95.89%
CHEMBL268 P43235 Cathepsin K 93.12% 96.85%
CHEMBL226 P30542 Adenosine A1 receptor 92.70% 95.93%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.68% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.95% 94.45%
CHEMBL221 P23219 Cyclooxygenase-1 90.77% 90.17%
CHEMBL333 P08253 Matrix metalloproteinase-2 89.75% 96.31%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 88.34% 82.38%
CHEMBL236 P41143 Delta opioid receptor 88.29% 99.35%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 88.14% 92.67%
CHEMBL255 P29275 Adenosine A2b receptor 87.52% 98.59%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.47% 99.23%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 87.47% 90.93%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 87.36% 90.71%
CHEMBL1949 P62937 Cyclophilin A 86.92% 98.57%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.79% 97.09%
CHEMBL5939 Q9NZ08 Endoplasmic reticulum aminopeptidase 1 86.36% 100.00%
CHEMBL2413 P32246 C-C chemokine receptor type 1 84.95% 89.50%
CHEMBL340 P08684 Cytochrome P450 3A4 84.10% 91.19%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.46% 95.89%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 83.38% 93.03%
CHEMBL206 P03372 Estrogen receptor alpha 82.93% 97.64%
CHEMBL2094135 Q96BI3 Gamma-secretase 82.47% 98.05%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 81.91% 92.08%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 81.54% 93.10%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.64% 100.00%
CHEMBL2535 P11166 Glucose transporter 80.36% 98.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.19% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 23250009
LOTUS LTS0167072
wikiData Q104887305