methyl 5-hydroxy-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhexanoate

Details

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Internal ID ee105a90-b54b-41b4-8871-0690edea52a8
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty acyl glycosides > Fatty acyl glycosides of mono- and disaccharides
IUPAC Name methyl 5-hydroxy-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhexanoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C13H24O9/c1-6(15)3-7(4-9(16)20-2)21-13-12(19)11(18)10(17)8(5-14)22-13/h6-8,10-15,17-19H,3-5H2,1-2H3/t6?,7?,8-,10-,11+,12-,13-/m1/s1
InChI Key VYMPNVIBXBAUDP-QEZIXSMGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C13H24O9
Molecular Weight 324.32 g/mol
Exact Mass 324.14203234 g/mol
Topological Polar Surface Area (TPSA) 146.00 Ų
XlogP -2.10
Atomic LogP (AlogP) -2.49
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl 5-hydroxy-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhexanoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7680 76.80%
Caco-2 - 0.8267 82.67%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7025 70.25%
OATP2B1 inhibitior - 0.8564 85.64%
OATP1B1 inhibitior + 0.8725 87.25%
OATP1B3 inhibitior + 0.9375 93.75%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9330 93.30%
P-glycoprotein inhibitior - 0.9243 92.43%
P-glycoprotein substrate - 0.8761 87.61%
CYP3A4 substrate + 0.5368 53.68%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8885 88.85%
CYP3A4 inhibition - 0.9208 92.08%
CYP2C9 inhibition - 0.9497 94.97%
CYP2C19 inhibition - 0.9567 95.67%
CYP2D6 inhibition - 0.9400 94.00%
CYP1A2 inhibition - 0.9370 93.70%
CYP2C8 inhibition - 0.9258 92.58%
CYP inhibitory promiscuity - 0.9797 97.97%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7807 78.07%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9589 95.89%
Skin irritation - 0.8372 83.72%
Skin corrosion - 0.9664 96.64%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5849 58.49%
Micronuclear - 0.7941 79.41%
Hepatotoxicity - 0.6944 69.44%
skin sensitisation - 0.8947 89.47%
Respiratory toxicity - 0.6222 62.22%
Reproductive toxicity - 0.6000 60.00%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity + 0.5455 54.55%
Acute Oral Toxicity (c) III 0.6339 63.39%
Estrogen receptor binding - 0.5422 54.22%
Androgen receptor binding - 0.6344 63.44%
Thyroid receptor binding - 0.5089 50.89%
Glucocorticoid receptor binding + 0.5672 56.72%
Aromatase binding + 0.5192 51.92%
PPAR gamma - 0.5694 56.94%
Honey bee toxicity - 0.8168 81.68%
Biodegradation - 0.5750 57.50%
Crustacea aquatic toxicity - 0.8500 85.00%
Fish aquatic toxicity - 0.7566 75.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.41% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.74% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 95.80% 83.82%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.29% 91.11%
CHEMBL2581 P07339 Cathepsin D 91.49% 98.95%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 89.91% 96.47%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.01% 99.17%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 86.12% 94.33%
CHEMBL3401 O75469 Pregnane X receptor 86.02% 94.73%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.64% 96.00%
CHEMBL3437 Q16853 Amine oxidase, copper containing 84.94% 94.00%
CHEMBL5255 O00206 Toll-like receptor 4 84.70% 92.50%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.52% 86.92%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 81.78% 98.75%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.14% 93.56%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 80.79% 95.71%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 80.69% 82.50%
CHEMBL220 P22303 Acetylcholinesterase 80.53% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dalbergia odorifera

Cross-Links

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PubChem 5319679
NPASS NPC292179