Meridianin D

Details

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Internal ID 7a742650-567d-4967-ac5a-9460385c4a93
Taxonomy Organoheterocyclic compounds > Indoles and derivatives > Indoles
IUPAC Name 4-(6-bromo-1H-indol-3-yl)pyrimidin-2-amine
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C12H9BrN4/c13-7-1-2-8-9(6-16-11(8)5-7)10-3-4-15-12(14)17-10/h1-6,16H,(H2,14,15,17)
InChI Key VBPYLWZBNRFLEM-UHFFFAOYSA-N
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C12H9BrN4
Molecular Weight 289.13 g/mol
Exact Mass 288.00106 g/mol
Topological Polar Surface Area (TPSA) 67.60 Ų
XlogP 2.30
Atomic LogP (AlogP) 2.97
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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4-(6-bromo-1H-indol-3-yl)pyrimidin-2-amine
213473-01-9
2-Pyrimidinamine, 4-(6-bromo-1H-indol-3-yl)-
NSC714369
CHEMBL46440
SCHEMBL23539138
SCHEMBL31094009
BDBM10841
DTXSID20328011
NSC-714369
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Meridianin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9927 99.27%
Caco-2 + 0.6360 63.60%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability + 0.6000 60.00%
Subcellular localzation Lysosomes 0.4272 42.72%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9614 96.14%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.5000 50.00%
P-glycoprotein inhibitior - 0.9414 94.14%
P-glycoprotein substrate - 0.6657 66.57%
CYP3A4 substrate - 0.5743 57.43%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8511 85.11%
CYP3A4 inhibition - 0.5490 54.90%
CYP2C9 inhibition - 0.5795 57.95%
CYP2C19 inhibition + 0.7197 71.97%
CYP2D6 inhibition - 0.9409 94.09%
CYP1A2 inhibition + 0.9392 93.92%
CYP2C8 inhibition + 0.6720 67.20%
CYP inhibitory promiscuity + 0.7547 75.47%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8038 80.38%
Carcinogenicity (trinary) Non-required 0.4719 47.19%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.7311 73.11%
Skin irritation - 0.7562 75.62%
Skin corrosion - 0.9731 97.31%
Ames mutagenesis + 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5555 55.55%
Micronuclear + 0.7800 78.00%
Hepatotoxicity + 0.5250 52.50%
skin sensitisation - 0.8894 88.94%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.7879 78.79%
Acute Oral Toxicity (c) III 0.4168 41.68%
Estrogen receptor binding + 0.9610 96.10%
Androgen receptor binding + 0.5731 57.31%
Thyroid receptor binding + 0.8152 81.52%
Glucocorticoid receptor binding + 0.8208 82.08%
Aromatase binding + 0.9622 96.22%
PPAR gamma + 0.8480 84.80%
Honey bee toxicity - 0.8924 89.24%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.7400 74.00%
Fish aquatic toxicity + 0.7906 79.06%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 120 nM
IC50
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1951 P21397 Monoamine oxidase A 99.57% 91.49%
CHEMBL5443 O00311 Cell division cycle 7-related protein kinase 99.54% 96.11%
CHEMBL2292 Q13627 Dual-specificity tyrosine-phosphorylation regulated kinase 1A 97.63% 93.24%
CHEMBL3038469 P24941 CDK2/Cyclin A 95.18% 91.38%
CHEMBL5543 Q9Y463 Dual specificity tyrosine-phosphorylation-regulated kinase 1B 94.83% 94.70%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 93.11% 89.62%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.27% 94.00%
CHEMBL240 Q12809 HERG 91.73% 89.76%
CHEMBL241 Q14432 Phosphodiesterase 3A 91.24% 92.94%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 90.82% 82.86%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.81% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.90% 91.11%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 86.35% 100.00%
CHEMBL2535 P11166 Glucose transporter 86.18% 98.75%
CHEMBL3959 P16083 Quinone reductase 2 85.83% 89.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.55% 94.45%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 84.34% 96.67%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 83.97% 96.00%
CHEMBL3286 P00749 Urokinase-type plasminogen activator 83.04% 97.88%
CHEMBL1811 P34995 Prostanoid EP1 receptor 82.92% 95.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.72% 95.89%
CHEMBL4145 Q9UKV0 Histone deacetylase 9 82.70% 85.49%
CHEMBL213 P08588 Beta-1 adrenergic receptor 82.47% 95.56%
CHEMBL1781 P11387 DNA topoisomerase I 82.45% 97.00%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 81.93% 97.23%
CHEMBL5747 Q92793 CREB-binding protein 81.90% 95.12%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.69% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 401171
LOTUS LTS0087293
wikiData Q82090192