Mederrhodin A

Details

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Internal ID 85b81e86-ae79-4c01-9e9b-70a20137612b
Taxonomy Phenylpropanoids and polyketides > Isochromanequinones
IUPAC Name (11R,15R,17R)-5-[(5S,6R)-4-(dimethylamino)-5-hydroxy-6-methyloxan-2-yl]-2,9-dihydroxy-17-methyl-12,16-dioxatetracyclo[8.7.0.03,8.011,15]heptadeca-1(10),2,5,8-tetraene-4,7,13-trione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C24H27NO9/c1-8-16-19(24-14(32-8)7-15(27)34-24)23(31)17-12(26)5-10(21(29)18(17)22(16)30)13-6-11(25(3)4)20(28)9(2)33-13/h5,8-9,11,13-14,20,24,28,30-31H,6-7H2,1-4H3/t8-,9-,11?,13?,14-,20-,24+/m1/s1
InChI Key YKHPVCQWMSOJBO-AJHFTWGYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C24H27NO9
Molecular Weight 473.50 g/mol
Exact Mass 473.16858144 g/mol
Topological Polar Surface Area (TPSA) 143.00 Ų
XlogP 0.90
Atomic LogP (AlogP) 1.32
H-Bond Acceptor 10
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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6-Hydroxymedermycin
97413-41-7
2H-Furo(3,2-b)naphtho(2,3-d)pyran-2,6,11-trione, 3,3a,5,11b-tetrahydro-7,10-dihydroxy-5-methyl-8-(2,3,6-trideoxy-3-(dimethylamino)-D-arabino-hexopyranosyl)-, (3aR-(3aalpha,5alpha,11balpha))-

2D Structure

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2D Structure of Mederrhodin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9752 97.52%
Caco-2 - 0.7771 77.71%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.5169 51.69%
OATP2B1 inhibitior - 0.8578 85.78%
OATP1B1 inhibitior + 0.8404 84.04%
OATP1B3 inhibitior + 0.9106 91.06%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.6593 65.93%
P-glycoprotein inhibitior - 0.5983 59.83%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.6462 64.62%
CYP2C9 substrate - 0.8000 80.00%
CYP2D6 substrate - 0.8023 80.23%
CYP3A4 inhibition - 0.7728 77.28%
CYP2C9 inhibition - 0.6578 65.78%
CYP2C19 inhibition - 0.6049 60.49%
CYP2D6 inhibition - 0.8105 81.05%
CYP1A2 inhibition - 0.5796 57.96%
CYP2C8 inhibition - 0.6984 69.84%
CYP inhibitory promiscuity - 0.7943 79.43%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.4212 42.12%
Eye corrosion - 0.9871 98.71%
Eye irritation - 0.9252 92.52%
Skin irritation - 0.7765 77.65%
Skin corrosion - 0.9277 92.77%
Ames mutagenesis + 0.7672 76.72%
Human Ether-a-go-go-Related Gene inhibition - 0.6566 65.66%
Micronuclear + 0.6800 68.00%
Hepatotoxicity + 0.6750 67.50%
skin sensitisation - 0.8420 84.20%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity - 0.7651 76.51%
Acute Oral Toxicity (c) III 0.5873 58.73%
Estrogen receptor binding + 0.5321 53.21%
Androgen receptor binding + 0.6518 65.18%
Thyroid receptor binding - 0.5655 56.55%
Glucocorticoid receptor binding + 0.7809 78.09%
Aromatase binding - 0.5193 51.93%
PPAR gamma - 0.5000 50.00%
Honey bee toxicity - 0.8182 81.82%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9376 93.76%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.09% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.31% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.39% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.46% 95.56%
CHEMBL2996 Q05655 Protein kinase C delta 92.70% 97.79%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.42% 99.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.61% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 85.47% 96.09%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 84.91% 85.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.25% 100.00%
CHEMBL299 P17252 Protein kinase C alpha 84.21% 98.03%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 81.76% 96.37%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 81.73% 93.03%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 81.54% 96.00%
CHEMBL3401 O75469 Pregnane X receptor 81.06% 94.73%
CHEMBL217 P14416 Dopamine D2 receptor 80.31% 95.62%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 80.17% 95.64%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 3086448
LOTUS LTS0114325
wikiData Q82884664