Marinobactin-D1

Details

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Internal ID c2baafed-6717-43f6-87b2-a6dcd7a8dd63
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Oligopeptides
IUPAC Name (2S)-5-[acetyl(hydroxy)amino]-2-[[(2S)-2-[[(2R)-5-[acetyl(hydroxy)amino]-2-[[(2R)-2-[[(2S,7R,8R)-8-[[(Z)-hexadec-9-enoyl]amino]-7-hydroxy-6,9-dioxo-1,5-diazonane-2-carbonyl]amino]-3-hydroxypropanoyl]amino]pentanoyl]amino]-3-hydroxypropanoyl]amino]pentanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C44H75N9O16/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-21-35(58)51-36-37(59)43(65)45-23-22-31(47-42(36)64)39(61)50-33(26-54)40(62)46-30(19-17-24-52(68)28(2)56)38(60)49-34(27-55)41(63)48-32(44(66)67)20-18-25-53(69)29(3)57/h9-10,30-34,36-37,54-55,59,68-69H,4-8,11-27H2,1-3H3,(H,45,65)(H,46,62)(H,47,64)(H,48,63)(H,49,60)(H,50,61)(H,51,58)(H,66,67)/b10-9-/t30-,31+,32+,33-,34+,36-,37-/m1/s1
InChI Key OCPXGGLXMCBXGP-OKIGRURVSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C44H75N9O16
Molecular Weight 986.10 g/mol
Exact Mass 985.53317734 g/mol
Topological Polar Surface Area (TPSA) 383.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -1.86
H-Bond Acceptor 15
H-Bond Donor 13
Rotatable Bonds 33

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Marinobactin-D1

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6453 64.53%
Caco-2 - 0.8575 85.75%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.5406 54.06%
OATP2B1 inhibitior - 0.8597 85.97%
OATP1B1 inhibitior + 0.8195 81.95%
OATP1B3 inhibitior + 0.9215 92.15%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9304 93.04%
P-glycoprotein inhibitior + 0.7430 74.30%
P-glycoprotein substrate + 0.7677 76.77%
CYP3A4 substrate + 0.6985 69.85%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8605 86.05%
CYP3A4 inhibition + 0.5138 51.38%
CYP2C9 inhibition - 0.8284 82.84%
CYP2C19 inhibition - 0.8055 80.55%
CYP2D6 inhibition - 0.8828 88.28%
CYP1A2 inhibition - 0.8536 85.36%
CYP2C8 inhibition + 0.5384 53.84%
CYP inhibitory promiscuity - 0.9691 96.91%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.7200 72.00%
Carcinogenicity (trinary) Non-required 0.4690 46.90%
Eye corrosion - 0.9808 98.08%
Eye irritation - 0.8975 89.75%
Skin irritation - 0.7582 75.82%
Skin corrosion - 0.9233 92.33%
Ames mutagenesis - 0.7832 78.32%
Human Ether-a-go-go-Related Gene inhibition - 0.5078 50.78%
Micronuclear + 0.7900 79.00%
Hepatotoxicity - 0.5950 59.50%
skin sensitisation - 0.8406 84.06%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.6086 60.86%
Acute Oral Toxicity (c) III 0.6169 61.69%
Estrogen receptor binding + 0.7635 76.35%
Androgen receptor binding + 0.6518 65.18%
Thyroid receptor binding + 0.5452 54.52%
Glucocorticoid receptor binding + 0.5383 53.83%
Aromatase binding + 0.6261 62.61%
PPAR gamma + 0.7022 70.22%
Honey bee toxicity - 0.8220 82.20%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.6687 66.87%
Fish aquatic toxicity + 0.7726 77.26%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.70% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 99.42% 99.17%
CHEMBL5103 Q969S8 Histone deacetylase 10 98.36% 90.08%
CHEMBL3359 P21462 Formyl peptide receptor 1 97.10% 93.56%
CHEMBL4588 P22894 Matrix metalloproteinase 8 96.50% 94.66%
CHEMBL3837 P07711 Cathepsin L 96.39% 96.61%
CHEMBL236 P41143 Delta opioid receptor 96.29% 99.35%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 96.17% 93.10%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.66% 96.09%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 95.22% 93.00%
CHEMBL259 P32245 Melanocortin receptor 4 94.83% 95.38%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 94.26% 98.33%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 93.84% 97.64%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 93.69% 91.81%
CHEMBL221 P23219 Cyclooxygenase-1 93.51% 90.17%
CHEMBL255 P29275 Adenosine A2b receptor 93.22% 98.59%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.08% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.32% 97.09%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 91.23% 96.47%
CHEMBL340 P08684 Cytochrome P450 3A4 91.03% 91.19%
CHEMBL3310 Q96DB2 Histone deacetylase 11 90.83% 88.56%
CHEMBL2514 O95665 Neurotensin receptor 2 90.73% 100.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 90.12% 100.00%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 89.45% 95.00%
CHEMBL3629 P68400 Casein kinase II alpha 88.79% 98.89%
CHEMBL5255 O00206 Toll-like receptor 4 88.38% 92.50%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.33% 99.23%
CHEMBL4979 P13866 Sodium/glucose cotransporter 1 88.12% 98.24%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 88.10% 92.08%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 87.48% 97.29%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.25% 94.45%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 85.84% 95.71%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.46% 100.00%
CHEMBL3776 Q14790 Caspase-8 84.25% 97.06%
CHEMBL256 P0DMS8 Adenosine A3 receptor 84.09% 95.93%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.06% 95.50%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 83.88% 91.03%
CHEMBL2001 Q9H244 Purinergic receptor P2Y12 83.77% 96.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 83.10% 96.90%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.97% 89.00%
CHEMBL1944495 P28065 Proteasome subunit beta type-9 82.96% 97.50%
CHEMBL1781 P11387 DNA topoisomerase I 82.74% 97.00%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 82.59% 82.69%
CHEMBL237 P41145 Kappa opioid receptor 82.36% 98.10%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.26% 96.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.22% 97.14%
CHEMBL5028 O14672 ADAM10 81.80% 97.50%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.54% 90.71%
CHEMBL1075317 P61964 WD repeat-containing protein 5 80.51% 96.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139585808
LOTUS LTS0157355
wikiData Q77492190