Malyngolide dimer

Details

Top
Internal ID c650e508-a4ec-418a-9f5b-5acef95f1384
Taxonomy Phenylpropanoids and polyketides > Macrolides and analogues
IUPAC Name (3R,6S,9R,12S)-6,12-bis(hydroxymethyl)-3,9-dimethyl-6,12-di(nonyl)-1,7-dioxacyclododecane-2,8-dione
SMILES (Canonical) CCCCCCCCCC1(CCC(C(=O)OC(CCC(C(=O)O1)C)(CCCCCCCCC)CO)C)CO
SMILES (Isomeric) CCCCCCCCC[C@]1(CC[C@H](C(=O)O[C@](CC[C@H](C(=O)O1)C)(CCCCCCCCC)CO)C)CO
InChI InChI=1S/C32H60O6/c1-5-7-9-11-13-15-17-21-31(25-33)23-19-27(3)30(36)38-32(26-34,24-20-28(4)29(35)37-31)22-18-16-14-12-10-8-6-2/h27-28,33-34H,5-26H2,1-4H3/t27-,28-,31+,32+/m1/s1
InChI Key YUKFGKYWDWLMAR-CKROWEISSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C32H60O6
Molecular Weight 540.80 g/mol
Exact Mass 540.43898963 g/mol
Topological Polar Surface Area (TPSA) 93.10 Ų
XlogP 9.60
Atomic LogP (AlogP) 7.66
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 18

Synonyms

Top
DTXSID501334023
(3R,6S,9R,12S)-6,12-bis(hydroxymethyl)-3,9-dimethyl-6,12-di(nonyl)-1,7-dioxacyclododecane-2,8-dione
RefChem:925252
DTXCID401763433
CHEMBL1094284
CHEBI:210964
(3R,6S,9R,12S)-6,12-bis(hydroxymethyl)-3,9-dimethyl-6,12-dinonyl-1,7-dioxacyclododecane-2,8-dione

2D Structure

Top
2D Structure of Malyngolide dimer

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8611 86.11%
Caco-2 - 0.6917 69.17%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.8196 81.96%
OATP2B1 inhibitior - 0.5723 57.23%
OATP1B1 inhibitior + 0.9088 90.88%
OATP1B3 inhibitior + 0.9027 90.27%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior + 0.6410 64.10%
P-glycoprotein inhibitior - 0.4623 46.23%
P-glycoprotein substrate - 0.7865 78.65%
CYP3A4 substrate + 0.5157 51.57%
CYP2C9 substrate - 0.5827 58.27%
CYP2D6 substrate - 0.8653 86.53%
CYP3A4 inhibition + 0.5115 51.15%
CYP2C9 inhibition - 0.8876 88.76%
CYP2C19 inhibition - 0.8575 85.75%
CYP2D6 inhibition - 0.9439 94.39%
CYP1A2 inhibition - 0.8512 85.12%
CYP2C8 inhibition - 0.8961 89.61%
CYP inhibitory promiscuity - 0.9736 97.36%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.6197 61.97%
Eye corrosion - 0.9837 98.37%
Eye irritation - 0.6723 67.23%
Skin irritation - 0.7861 78.61%
Skin corrosion - 0.9652 96.52%
Ames mutagenesis - 0.9137 91.37%
Human Ether-a-go-go-Related Gene inhibition - 0.5138 51.38%
Micronuclear - 0.8900 89.00%
Hepatotoxicity + 0.5049 50.49%
skin sensitisation - 0.9225 92.25%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity - 0.5116 51.16%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity + 0.6991 69.91%
Acute Oral Toxicity (c) III 0.5702 57.02%
Estrogen receptor binding + 0.6257 62.57%
Androgen receptor binding + 0.7347 73.47%
Thyroid receptor binding - 0.5364 53.64%
Glucocorticoid receptor binding - 0.5060 50.60%
Aromatase binding + 0.5426 54.26%
PPAR gamma - 0.5000 50.00%
Honey bee toxicity - 0.9766 97.66%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.7304 73.04%
Fish aquatic toxicity + 0.8637 86.37%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL299 P17252 Protein kinase C alpha 99.06% 98.03%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.11% 97.25%
CHEMBL2581 P07339 Cathepsin D 95.66% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.69% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.59% 96.09%
CHEMBL2996 Q05655 Protein kinase C delta 92.90% 97.79%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 88.78% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.52% 97.09%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.39% 95.50%
CHEMBL218 P21554 Cannabinoid CB1 receptor 83.22% 96.61%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 82.99% 97.29%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.16% 95.56%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.77% 92.94%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.52% 92.86%
CHEMBL4462 Q8IXJ6 NAD-dependent deacetylase sirtuin 2 81.29% 90.24%
CHEMBL230 P35354 Cyclooxygenase-2 81.07% 89.63%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.07% 100.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.95% 100.00%
CHEMBL5255 O00206 Toll-like receptor 4 80.52% 92.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.42% 99.17%
CHEMBL2001 Q9H244 Purinergic receptor P2Y12 80.38% 96.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 46211780
LOTUS LTS0224154
wikiData Q105363292