Malvidin 3-rutinoside

Details

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Internal ID f8562830-699a-4230-92ce-8bfbc2a97efa
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-3-O-glycosides
IUPAC Name (2R,4S,5R)-2-[[(3S,6S)-6-[5,7-dihydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)chromenylium-3-yl]oxy-3,4,5-trihydroxyoxan-2-yl]methoxy]-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OCC2C(C(C(C(O2)OC3=CC4=C(C=C(C=C4[O+]=C3C5=CC(=C(C(=C5)OC)O)OC)O)O)O)O)O)O)O)O
SMILES (Isomeric) CC1[C@@H]([C@@H](C([C@@H](O1)OCC2[C@H](C(C([C@@H](O2)OC3=CC4=C(C=C(C=C4[O+]=C3C5=CC(=C(C(=C5)OC)O)OC)O)O)O)O)O)O)O)O
InChI InChI=1S/C29H34O16/c1-10-20(32)23(35)25(37)28(42-10)41-9-19-22(34)24(36)26(38)29(45-19)44-18-8-13-14(31)6-12(30)7-15(13)43-27(18)11-4-16(39-2)21(33)17(5-11)40-3/h4-8,10,19-20,22-26,28-29,32,34-38H,9H2,1-3H3,(H2-,30,31,33)/p+1/t10?,19?,20-,22+,23-,24?,25?,26?,28+,29+/m0/s1
InChI Key YCDMGCUGMVVWAB-PBTGETTJSA-O
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C29H35O16+
Molecular Weight 639.60 g/mol
Exact Mass 639.19251002 g/mol
Topological Polar Surface Area (TPSA) 238.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.45
H-Bond Acceptor 15
H-Bond Donor 9
Rotatable Bonds 8

Synonyms

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CHEBI:185240
LMPK12010376
(2R,4S,5R)-2-[[(3S,6S)-6-[5,7-dihydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)chromenylium-3-yl]oxy-3,4,5-trihydroxyoxan-2-yl]methoxy]-6-methyloxane-3,4,5-triol

2D Structure

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2D Structure of Malvidin 3-rutinoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8042 80.42%
Caco-2 - 0.9050 90.50%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.4955 49.55%
OATP2B1 inhibitior - 0.7192 71.92%
OATP1B1 inhibitior + 0.8557 85.57%
OATP1B3 inhibitior + 0.9315 93.15%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.6662 66.62%
P-glycoprotein inhibitior - 0.5210 52.10%
P-glycoprotein substrate + 0.5320 53.20%
CYP3A4 substrate + 0.6253 62.53%
CYP2C9 substrate - 0.8109 81.09%
CYP2D6 substrate - 0.8088 80.88%
CYP3A4 inhibition - 0.9643 96.43%
CYP2C9 inhibition - 0.9064 90.64%
CYP2C19 inhibition - 0.8689 86.89%
CYP2D6 inhibition - 0.8989 89.89%
CYP1A2 inhibition - 0.8827 88.27%
CYP2C8 inhibition + 0.7787 77.87%
CYP inhibitory promiscuity - 0.7208 72.08%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6300 63.00%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9075 90.75%
Skin irritation - 0.8362 83.62%
Skin corrosion - 0.9559 95.59%
Ames mutagenesis - 0.6091 60.91%
Human Ether-a-go-go-Related Gene inhibition + 0.7400 74.00%
Micronuclear + 0.7018 70.18%
Hepatotoxicity - 0.7500 75.00%
skin sensitisation - 0.9360 93.60%
Respiratory toxicity - 0.5333 53.33%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity - 0.6500 65.00%
Nephrotoxicity - 0.9272 92.72%
Acute Oral Toxicity (c) III 0.6671 66.71%
Estrogen receptor binding + 0.8212 82.12%
Androgen receptor binding - 0.5547 55.47%
Thyroid receptor binding + 0.5876 58.76%
Glucocorticoid receptor binding + 0.6340 63.40%
Aromatase binding + 0.6132 61.32%
PPAR gamma + 0.7178 71.78%
Honey bee toxicity - 0.7824 78.24%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6349 63.49%
Fish aquatic toxicity + 0.8030 80.30%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.29% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.20% 96.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.29% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.55% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 94.48% 92.94%
CHEMBL3714130 P46095 G-protein coupled receptor 6 94.06% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.99% 86.33%
CHEMBL1951 P21397 Monoamine oxidase A 92.85% 91.49%
CHEMBL2581 P07339 Cathepsin D 90.48% 98.95%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 89.24% 89.62%
CHEMBL4355 O14976 Serine/threonine-protein kinase GAK 89.20% 89.32%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.84% 99.17%
CHEMBL1937 Q92769 Histone deacetylase 2 87.62% 94.75%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 87.36% 96.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.18% 99.15%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.38% 92.62%
CHEMBL3401 O75469 Pregnane X receptor 83.68% 94.73%
CHEMBL5925 P22413 Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 82.61% 92.38%
CHEMBL3194 P02766 Transthyretin 82.10% 90.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.50% 95.56%
CHEMBL4208 P20618 Proteasome component C5 80.11% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Curcuma alismatifolia
Morus alba
Petunia integrifolia

Cross-Links

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PubChem 44256981
NPASS NPC235558
LOTUS LTS0086428
wikiData Q104389631