Madhucoside B

Details

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Internal ID f5dc192d-8f04-4ccd-9de1-239dcd4767f5
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(2S,3R,4S,5S)-3-[(2S,3R,4R,5S,6S)-3,5-dihydroxy-4-[(2S,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-6-methyloxan-2-yl]oxy-4,5-dihydroxyoxan-2-yl] (4aS,6aR,6aS,6bR,8R,8aR,9R,10R,11S,12aR,14bS)-10-[(2R,3R,4S,5S,6R)-3-[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8,11-dihydroxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C69H112O36/c1-25-36(78)41(83)44(86)56(95-25)99-47-34(19-71)98-59(51(45(47)87)101-55-43(85)38(80)31(76)20-92-55)100-48-37(79)26(2)96-57(46(48)88)102-49-39(81)32(77)21-93-58(49)105-62(90)68-13-11-63(3,4)15-28(68)27-9-10-35-64(5)16-30(75)54(65(6,22-72)52(64)29(74)17-67(35,8)66(27,7)12-14-68)104-60-50(42(84)40(82)33(18-70)97-60)103-61-53(89)69(91,23-73)24-94-61/h9,25-26,28-61,70-89,91H,10-24H2,1-8H3/t25-,26-,28-,29+,30-,31+,32-,33+,34+,35+,36-,37-,38-,39-,40+,41+,42-,43+,44+,45-,46+,47+,48+,49+,50+,51+,52+,53-,54-,55-,56-,57-,58-,59-,60-,61-,64+,65-,66+,67+,68-,69+/m0/s1
InChI Key GOCQBMDZEDNKSZ-RAJYQNHOSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C69H112O36
Molecular Weight 1517.60 g/mol
Exact Mass 1516.6933299 g/mol
Topological Polar Surface Area (TPSA) 571.00 Ų
XlogP -6.50
Atomic LogP (AlogP) -7.67
H-Bond Acceptor 36
H-Bond Donor 21
Rotatable Bonds 18

Synonyms

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CHEBI:66653
RefChem:155076
683205-83-6
((2S,3R,4S,5S)-3-((2S,3R,4R,5S,6S)-3,5-dihydroxy-4-((2S,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-5-((2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl)oxy-3-((2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl)oxy-6-methyloxan-2-yl)oxy-4,5-dihydroxyoxan-2-yl) (4aS,6aR,6aS,6bR,8R,8aR,9R,10R,11S,12aR,14bS)-10-((2R,3R,4S,5S,6R)-3-((2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl)oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl)oxy-8,11-dihydroxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
Q27135271
6-deoxy-alpha-L-mannopyranosyl-(1->4)-[beta-D-xylopyranosyl-(1->2)]-beta-D-glucopyranosyl-(1->3)-6-deoxy-alpha-L-mannopyranosyl-(1->2)-1-O-[(2beta,3beta,6beta)-3-({2-O-[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)tetrahydrofuran-2-yl]-beta-D-glucopyranosyl}oxy)-2,6,23-trihydroxy-28-oxoolean-12-en-28-yl]-alpha-L-arabinopyranose

2D Structure

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2D Structure of Madhucoside B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8593 85.93%
Caco-2 - 0.8663 86.63%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.8538 85.38%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8394 83.94%
OATP1B3 inhibitior - 0.2138 21.38%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.9580 95.80%
P-glycoprotein inhibitior + 0.7436 74.36%
P-glycoprotein substrate + 0.6728 67.28%
CYP3A4 substrate + 0.7399 73.99%
CYP2C9 substrate - 0.7973 79.73%
CYP2D6 substrate - 0.8649 86.49%
CYP3A4 inhibition - 0.9081 90.81%
CYP2C9 inhibition - 0.8652 86.52%
CYP2C19 inhibition - 0.9198 91.98%
CYP2D6 inhibition - 0.9299 92.99%
CYP1A2 inhibition - 0.9086 90.86%
CYP2C8 inhibition + 0.7878 78.78%
CYP inhibitory promiscuity - 0.9357 93.57%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5124 51.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.8970 89.70%
Skin irritation - 0.5174 51.74%
Skin corrosion - 0.9392 93.92%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7562 75.62%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.8000 80.00%
skin sensitisation - 0.9021 90.21%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.7881 78.81%
Acute Oral Toxicity (c) III 0.6216 62.16%
Estrogen receptor binding + 0.7210 72.10%
Androgen receptor binding + 0.7583 75.83%
Thyroid receptor binding + 0.7003 70.03%
Glucocorticoid receptor binding + 0.7974 79.74%
Aromatase binding + 0.6910 69.10%
PPAR gamma + 0.8239 82.39%
Honey bee toxicity - 0.6305 63.05%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5950 59.50%
Fish aquatic toxicity + 0.9565 95.65%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.31% 91.11%
CHEMBL3714130 P46095 G-protein coupled receptor 6 97.84% 97.36%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.97% 94.45%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 94.77% 95.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.41% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.85% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.61% 95.56%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 92.69% 86.92%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 92.49% 96.77%
CHEMBL226 P30542 Adenosine A1 receptor 90.41% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.27% 96.09%
CHEMBL2581 P07339 Cathepsin D 90.01% 98.95%
CHEMBL218 P21554 Cannabinoid CB1 receptor 88.83% 96.61%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 88.75% 91.24%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.50% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.20% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.01% 94.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 85.54% 94.33%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.50% 91.07%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.61% 95.50%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 84.27% 83.57%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.72% 97.25%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.03% 92.94%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.01% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asparagus setaceus
Coleus amboinicus
Madhuca longifolia var. latifolia

Cross-Links

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PubChem 70697914
NPASS NPC143094
LOTUS LTS0004475
wikiData Q27135271