Lysidiside N

Details

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Internal ID dd907b23-e6c6-49d8-924e-05122d533d24
Taxonomy Phenylpropanoids and polyketides > Stilbenes > Stilbene glycosides
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-2-[3-hydroxy-5-[(E)-2-(4-hydroxyphenyl)ethenyl]phenoxy]-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3=CC(=CC(=C3)O)C=CC4=CC=C(C=C4)O)CO)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@@H]([C@H](O[C@H]2OC3=CC(=CC(=C3)O)/C=C/C4=CC=C(C=C4)O)CO)O)O)O)O)O
InChI InChI=1S/C26H32O12/c1-12-19(30)21(32)23(34)25(35-12)38-24-22(33)20(31)18(11-27)37-26(24)36-17-9-14(8-16(29)10-17)3-2-13-4-6-15(28)7-5-13/h2-10,12,18-34H,11H2,1H3/b3-2+/t12-,18+,19-,20+,21+,22-,23+,24+,25-,26+/m0/s1
InChI Key MASPJNQRZIRSFR-ZBIDKOPJSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C26H32O12
Molecular Weight 536.50 g/mol
Exact Mass 536.18937645 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP 0.20
Atomic LogP (AlogP) -0.70
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 7

Synonyms

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CHEMBL574551

2D Structure

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2D Structure of Lysidiside N

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8111 81.11%
Caco-2 - 0.8966 89.66%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.8857 88.57%
Subcellular localzation Mitochondria 0.6710 67.10%
OATP2B1 inhibitior - 0.8485 84.85%
OATP1B1 inhibitior + 0.9186 91.86%
OATP1B3 inhibitior + 0.9727 97.27%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.4782 47.82%
P-glycoprotein inhibitior - 0.7804 78.04%
P-glycoprotein substrate - 0.7972 79.72%
CYP3A4 substrate + 0.5878 58.78%
CYP2C9 substrate - 0.6225 62.25%
CYP2D6 substrate - 0.8296 82.96%
CYP3A4 inhibition - 0.9088 90.88%
CYP2C9 inhibition - 0.9137 91.37%
CYP2C19 inhibition - 0.9043 90.43%
CYP2D6 inhibition - 0.9284 92.84%
CYP1A2 inhibition - 0.9331 93.31%
CYP2C8 inhibition + 0.5699 56.99%
CYP inhibitory promiscuity - 0.6241 62.41%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6022 60.22%
Eye corrosion - 0.9938 99.38%
Eye irritation - 0.9331 93.31%
Skin irritation - 0.8523 85.23%
Skin corrosion - 0.9605 96.05%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6981 69.81%
Micronuclear - 0.5041 50.41%
Hepatotoxicity - 0.9248 92.48%
skin sensitisation - 0.8583 85.83%
Respiratory toxicity - 0.7889 78.89%
Reproductive toxicity + 0.5111 51.11%
Mitochondrial toxicity - 0.8125 81.25%
Nephrotoxicity - 0.8266 82.66%
Acute Oral Toxicity (c) III 0.7370 73.70%
Estrogen receptor binding + 0.6739 67.39%
Androgen receptor binding - 0.5462 54.62%
Thyroid receptor binding + 0.6506 65.06%
Glucocorticoid receptor binding - 0.5337 53.37%
Aromatase binding + 0.7020 70.20%
PPAR gamma + 0.7538 75.38%
Honey bee toxicity - 0.6982 69.82%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.8050 80.50%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.24% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 95.34% 95.93%
CHEMBL3401 O75469 Pregnane X receptor 94.55% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.54% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 94.44% 96.00%
CHEMBL1951 P21397 Monoamine oxidase A 93.81% 91.49%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.89% 89.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 91.70% 97.36%
CHEMBL2581 P07339 Cathepsin D 91.31% 98.95%
CHEMBL242 Q92731 Estrogen receptor beta 90.53% 98.35%
CHEMBL3194 P02766 Transthyretin 89.26% 90.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.30% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.08% 96.09%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.33% 95.89%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.89% 86.92%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.52% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.48% 95.89%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 83.35% 91.71%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 82.96% 93.10%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.58% 97.09%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.44% 85.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lysidice brevicalyx

Cross-Links

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PubChem 25155596
LOTUS LTS0033354
wikiData Q105160489