Lyngbyabellin I

Details

Top
Internal ID a7906634-0866-4635-9e9b-d9193d7622a3
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Pentacarboxylic acids and derivatives
IUPAC Name [(2S,3S)-7,7-dichloro-1-[(1S)-1-(4-methoxycarbonyl-1,3-thiazol-2-yl)-2-methylpropoxy]-2-methyl-1-oxooctan-3-yl] 2-[(1R)-2-[(3R,4S)-3-acetyloxy-4-(butanoylamino)-6-methylheptanoyl]oxy-1-hydroxyethyl]-1,3-thiazole-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C38H55Cl2N3O12S2/c1-10-12-30(46)41-24(15-20(2)3)29(53-23(7)44)16-31(47)52-17-27(45)33-42-26(19-56-33)37(50)54-28(13-11-14-38(8,39)40)22(6)35(48)55-32(21(4)5)34-43-25(18-57-34)36(49)51-9/h18-22,24,27-29,32,45H,10-17H2,1-9H3,(H,41,46)/t22-,24-,27+,28-,29+,32-/m0/s1
InChI Key YUYKAWWLMZGIMI-AVOCOOMJSA-N
Popularity 3 references in papers

Physical and Chemical Properties

Top
Molecular Formula C38H55Cl2N3O12S2
Molecular Weight 880.90 g/mol
Exact Mass 879.2604219 g/mol
Topological Polar Surface Area (TPSA) 263.00 Ų
XlogP 7.20
Atomic LogP (AlogP) 7.08
H-Bond Acceptor 16
H-Bond Donor 2
Rotatable Bonds 24

Synonyms

Top
DTXSID001334028

2D Structure

Top
2D Structure of Lyngbyabellin I

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9235 92.35%
Caco-2 - 0.8522 85.22%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.6837 68.37%
OATP2B1 inhibitior - 0.8584 85.84%
OATP1B1 inhibitior + 0.8275 82.75%
OATP1B3 inhibitior + 0.9297 92.97%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.9699 96.99%
P-glycoprotein inhibitior + 0.7701 77.01%
P-glycoprotein substrate + 0.8207 82.07%
CYP3A4 substrate + 0.7240 72.40%
CYP2C9 substrate + 0.8067 80.67%
CYP2D6 substrate - 0.8527 85.27%
CYP3A4 inhibition + 0.5543 55.43%
CYP2C9 inhibition - 0.6968 69.68%
CYP2C19 inhibition - 0.5810 58.10%
CYP2D6 inhibition - 0.8793 87.93%
CYP1A2 inhibition - 0.6725 67.25%
CYP2C8 inhibition + 0.7425 74.25%
CYP inhibitory promiscuity - 0.7376 73.76%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.6638 66.38%
Carcinogenicity (trinary) Non-required 0.5824 58.24%
Eye corrosion - 0.9835 98.35%
Eye irritation - 0.9095 90.95%
Skin irritation - 0.7854 78.54%
Skin corrosion - 0.9221 92.21%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4217 42.17%
Micronuclear + 0.6800 68.00%
Hepatotoxicity - 0.5218 52.18%
skin sensitisation - 0.8381 83.81%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity - 0.5999 59.99%
Acute Oral Toxicity (c) III 0.6163 61.63%
Estrogen receptor binding + 0.8426 84.26%
Androgen receptor binding + 0.6506 65.06%
Thyroid receptor binding + 0.5803 58.03%
Glucocorticoid receptor binding + 0.7276 72.76%
Aromatase binding + 0.6812 68.12%
PPAR gamma + 0.7683 76.83%
Honey bee toxicity - 0.7517 75.17%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9423 94.23%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.60% 98.95%
CHEMBL230 P35354 Cyclooxygenase-2 98.86% 89.63%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.18% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 96.24% 99.17%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 94.14% 96.90%
CHEMBL3359 P21462 Formyl peptide receptor 1 93.64% 93.56%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 93.34% 97.29%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 93.04% 96.00%
CHEMBL221 P23219 Cyclooxygenase-1 92.39% 90.17%
CHEMBL3401 O75469 Pregnane X receptor 92.39% 94.73%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 92.18% 92.29%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.83% 91.11%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 90.98% 100.00%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 90.21% 85.94%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.33% 94.45%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 88.92% 97.21%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.22% 85.14%
CHEMBL4040 P28482 MAP kinase ERK2 86.10% 83.82%
CHEMBL1907 P15144 Aminopeptidase N 86.06% 93.31%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.07% 99.23%
CHEMBL2094135 Q96BI3 Gamma-secretase 84.27% 98.05%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.47% 100.00%
CHEMBL4662 P28074 Proteasome Macropain subunit MB1 83.45% 93.85%
CHEMBL2413 P32246 C-C chemokine receptor type 1 82.06% 89.50%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.65% 90.71%
CHEMBL1944495 P28065 Proteasome subunit beta type-9 81.41% 97.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.24% 100.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 80.11% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 80.02% 91.19%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 11556973
LOTUS LTS0183387
wikiData Q77497437