Lynamicin G

Details

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Internal ID f831768e-636b-4397-b4be-c96dda243631
Taxonomy Organoheterocyclic compounds > Indoles and derivatives > Indoles
IUPAC Name dimethyl 3,4-bis(5-chloro-1H-indol-3-yl)-1-methylpyrrole-2,5-dicarboxylate
SMILES (Canonical) CN1C(=C(C(=C1C(=O)OC)C2=CNC3=C2C=C(C=C3)Cl)C4=CNC5=C4C=C(C=C5)Cl)C(=O)OC
SMILES (Isomeric) CN1C(=C(C(=C1C(=O)OC)C2=CNC3=C2C=C(C=C3)Cl)C4=CNC5=C4C=C(C=C5)Cl)C(=O)OC
InChI InChI=1S/C25H19Cl2N3O4/c1-30-22(24(31)33-2)20(16-10-28-18-6-4-12(26)8-14(16)18)21(23(30)25(32)34-3)17-11-29-19-7-5-13(27)9-15(17)19/h4-11,28-29H,1-3H3
InChI Key HDSWTZRUKHSYDF-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C25H19Cl2N3O4
Molecular Weight 496.30 g/mol
Exact Mass 495.0752615 g/mol
Topological Polar Surface Area (TPSA) 89.10 Ų
XlogP 5.80
Atomic LogP (AlogP) 6.20
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

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dimethyl 3,4-bis(5-chloro-1H-indol-3-yl)-1-methylpyrrole-2,5-dicarboxylate
RefChem:154651
dimethyl 3-(5-chloro-1H-indol-3-yl)-4-(5-chloro-1-methylindol-3-yl)-1-methylpyrrole-2,5-dicarboxylate
CHEMBL3327032
CHEBI:218921

2D Structure

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2D Structure of Lynamicin G

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9754 97.54%
Caco-2 - 0.6158 61.58%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability + 0.7714 77.14%
Subcellular localzation Mitochondria 0.5700 57.00%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8865 88.65%
OATP1B3 inhibitior + 0.9310 93.10%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9595 95.95%
P-glycoprotein inhibitior + 0.7360 73.60%
P-glycoprotein substrate - 0.7453 74.53%
CYP3A4 substrate + 0.6670 66.70%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8795 87.95%
CYP3A4 inhibition - 0.6000 60.00%
CYP2C9 inhibition + 0.6950 69.50%
CYP2C19 inhibition + 0.6867 68.67%
CYP2D6 inhibition - 0.9005 90.05%
CYP1A2 inhibition + 0.8091 80.91%
CYP2C8 inhibition + 0.4532 45.32%
CYP inhibitory promiscuity + 0.8843 88.43%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8219 82.19%
Carcinogenicity (trinary) Non-required 0.4074 40.74%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9353 93.53%
Skin irritation - 0.8531 85.31%
Skin corrosion - 0.9525 95.25%
Ames mutagenesis - 0.7000 70.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6565 65.65%
Micronuclear + 0.7900 79.00%
Hepatotoxicity - 0.5125 51.25%
skin sensitisation - 0.9181 91.81%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.5583 55.83%
Acute Oral Toxicity (c) III 0.4996 49.96%
Estrogen receptor binding + 0.8898 88.98%
Androgen receptor binding + 0.6502 65.02%
Thyroid receptor binding + 0.7668 76.68%
Glucocorticoid receptor binding + 0.8250 82.50%
Aromatase binding + 0.5199 51.99%
PPAR gamma + 0.8080 80.80%
Honey bee toxicity - 0.9381 93.81%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9839 98.39%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.35% 94.45%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 95.99% 86.92%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.94% 96.09%
CHEMBL4208 P20618 Proteasome component C5 93.52% 90.00%
CHEMBL2292 Q13627 Dual-specificity tyrosine-phosphorylation regulated kinase 1A 93.44% 93.24%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.91% 94.00%
CHEMBL2581 P07339 Cathepsin D 92.62% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.19% 91.11%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 86.74% 93.03%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 83.40% 85.00%
CHEMBL2535 P11166 Glucose transporter 82.93% 98.75%
CHEMBL3155 P34969 Serotonin 7 (5-HT7) receptor 82.49% 90.71%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 81.93% 92.67%
CHEMBL3492 P49721 Proteasome Macropain subunit 80.35% 90.24%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 80.32% 96.67%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 118712025
LOTUS LTS0001953
wikiData Q77502369