Lynamicin F

Details

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Internal ID 6194be2b-68a4-4c4e-a147-8e7a09729842
Taxonomy Organoheterocyclic compounds > Indoles and derivatives > Indoles
IUPAC Name methyl 3,4-bis(5-chloro-1H-indol-3-yl)-1-methylpyrrole-2-carboxylate
SMILES (Canonical) CN1C=C(C(=C1C(=O)OC)C2=CNC3=C2C=C(C=C3)Cl)C4=CNC5=C4C=C(C=C5)Cl
SMILES (Isomeric) CN1C=C(C(=C1C(=O)OC)C2=CNC3=C2C=C(C=C3)Cl)C4=CNC5=C4C=C(C=C5)Cl
InChI InChI=1S/C23H17Cl2N3O2/c1-28-11-18(16-9-26-19-5-3-12(24)7-14(16)19)21(22(28)23(29)30-2)17-10-27-20-6-4-13(25)8-15(17)20/h3-11,26-27H,1-2H3
InChI Key WTHPKNLNQHMHLV-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C23H17Cl2N3O2
Molecular Weight 438.30 g/mol
Exact Mass 437.0697822 g/mol
Topological Polar Surface Area (TPSA) 62.80 Ų
XlogP 5.60
Atomic LogP (AlogP) 6.42
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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CHEMBL3326892

2D Structure

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2D Structure of Lynamicin F

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9953 99.53%
Caco-2 - 0.5477 54.77%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability + 0.7000 70.00%
Subcellular localzation Mitochondria 0.6880 68.80%
OATP2B1 inhibitior - 0.8586 85.86%
OATP1B1 inhibitior + 0.8846 88.46%
OATP1B3 inhibitior + 0.9426 94.26%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.9820 98.20%
P-glycoprotein inhibitior + 0.6639 66.39%
P-glycoprotein substrate - 0.6049 60.49%
CYP3A4 substrate + 0.6710 67.10%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8795 87.95%
CYP3A4 inhibition - 0.5387 53.87%
CYP2C9 inhibition + 0.7608 76.08%
CYP2C19 inhibition + 0.7979 79.79%
CYP2D6 inhibition - 0.8449 84.49%
CYP1A2 inhibition + 0.9077 90.77%
CYP2C8 inhibition + 0.5908 59.08%
CYP inhibitory promiscuity + 0.9609 96.09%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8219 82.19%
Carcinogenicity (trinary) Non-required 0.4627 46.27%
Eye corrosion - 0.9906 99.06%
Eye irritation - 0.9735 97.35%
Skin irritation - 0.8465 84.65%
Skin corrosion - 0.9467 94.67%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7286 72.86%
Micronuclear + 0.7900 79.00%
Hepatotoxicity + 0.5625 56.25%
skin sensitisation - 0.9125 91.25%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity - 0.6365 63.65%
Acute Oral Toxicity (c) II 0.4927 49.27%
Estrogen receptor binding + 0.9024 90.24%
Androgen receptor binding + 0.6426 64.26%
Thyroid receptor binding + 0.7964 79.64%
Glucocorticoid receptor binding + 0.8785 87.85%
Aromatase binding + 0.6278 62.78%
PPAR gamma + 0.8352 83.52%
Honey bee toxicity - 0.9176 91.76%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9545 95.45%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.52% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.67% 96.09%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 94.38% 86.92%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.85% 91.11%
CHEMBL4208 P20618 Proteasome component C5 93.20% 90.00%
CHEMBL2581 P07339 Cathepsin D 92.65% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.57% 94.00%
CHEMBL3155 P34969 Serotonin 7 (5-HT7) receptor 85.99% 90.71%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 85.47% 93.03%
CHEMBL2047 Q96RI1 Bile acid receptor FXR 84.05% 96.10%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.17% 86.33%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.69% 89.62%
CHEMBL3492 P49721 Proteasome Macropain subunit 81.31% 90.24%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 81.23% 85.00%
CHEMBL213 P08588 Beta-1 adrenergic receptor 81.14% 95.56%
CHEMBL1293289 P25440 Bromodomain-containing protein 2 80.71% 86.19%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 80.68% 92.29%
CHEMBL2535 P11166 Glucose transporter 80.61% 98.75%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.34% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.14% 95.56%
CHEMBL2292 Q13627 Dual-specificity tyrosine-phosphorylation regulated kinase 1A 80.12% 93.24%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.05% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 118711964
LOTUS LTS0151101
wikiData Q75063898