Lycorine O1,O2-di-(beta-D-glucopyranoside)

Details

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Internal ID 8b64f465-73be-4a01-800a-e1e70b130e68
Taxonomy Alkaloids and derivatives > Amaryllidaceae alkaloids > Lycorine-type amaryllidaceae alkaloids
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(1S,17S,18S,19S)-18-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,7-dioxa-12-azapentacyclo[10.6.1.02,10.04,8.015,19]nonadeca-2,4(8),9,15-tetraen-17-yl]oxy]oxane-3,4,5-triol
SMILES (Canonical) C1CN2CC3=CC4=C(C=C3C5C2C1=CC(C5OC6C(C(C(C(O6)CO)O)O)O)OC7C(C(C(C(O7)CO)O)O)O)OCO4
SMILES (Isomeric) C1CN2CC3=CC4=C(C=C3[C@H]5[C@H]2C1=C[C@@H]([C@H]5O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)OCO4
InChI InChI=1S/C28H37NO14/c30-7-16-20(32)22(34)24(36)27(41-16)40-15-3-10-1-2-29-6-11-4-13-14(39-9-38-13)5-12(11)18(19(10)29)26(15)43-28-25(37)23(35)21(33)17(8-31)42-28/h3-5,15-28,30-37H,1-2,6-9H2/t15-,16+,17+,18-,19+,20+,21+,22-,23-,24+,25+,26+,27+,28-/m0/s1
InChI Key NAGIBFPIZBJGNH-DKVFUARPSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H37NO14
Molecular Weight 611.60 g/mol
Exact Mass 611.22140485 g/mol
Topological Polar Surface Area (TPSA) 221.00 Ų
XlogP -3.20
Atomic LogP (AlogP) -3.60
H-Bond Acceptor 15
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Lycorine O1,O2-di-(beta-D-glucopyranoside)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8357 83.57%
Caco-2 - 0.8566 85.66%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.6006 60.06%
OATP2B1 inhibitior - 0.8601 86.01%
OATP1B1 inhibitior + 0.9068 90.68%
OATP1B3 inhibitior + 0.9370 93.70%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.7108 71.08%
P-glycoprotein inhibitior - 0.5591 55.91%
P-glycoprotein substrate - 0.6800 68.00%
CYP3A4 substrate + 0.6189 61.89%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.6681 66.81%
CYP3A4 inhibition - 0.9235 92.35%
CYP2C9 inhibition - 0.8870 88.70%
CYP2C19 inhibition - 0.8943 89.43%
CYP2D6 inhibition - 0.6286 62.86%
CYP1A2 inhibition + 0.5992 59.92%
CYP2C8 inhibition - 0.7135 71.35%
CYP inhibitory promiscuity - 0.8300 83.00%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5120 51.20%
Eye corrosion - 0.9845 98.45%
Eye irritation - 0.9404 94.04%
Skin irritation - 0.7464 74.64%
Skin corrosion - 0.9281 92.81%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8967 89.67%
Micronuclear + 0.7700 77.00%
Hepatotoxicity - 0.5250 52.50%
skin sensitisation - 0.8248 82.48%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity + 0.5101 51.01%
Acute Oral Toxicity (c) III 0.5861 58.61%
Estrogen receptor binding + 0.7361 73.61%
Androgen receptor binding + 0.6457 64.57%
Thyroid receptor binding - 0.5723 57.23%
Glucocorticoid receptor binding - 0.5732 57.32%
Aromatase binding + 0.5672 56.72%
PPAR gamma + 0.6623 66.23%
Honey bee toxicity - 0.6527 65.27%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.7333 73.33%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.52% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.88% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.40% 94.45%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 92.46% 83.57%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.57% 95.89%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 89.73% 90.24%
CHEMBL4208 P20618 Proteasome component C5 89.17% 90.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 88.51% 96.77%
CHEMBL2581 P07339 Cathepsin D 88.22% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.19% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.54% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.76% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.32% 100.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.18% 92.62%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.13% 90.71%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.34% 99.17%
CHEMBL4895 P30530 Tyrosine-protein kinase receptor UFO 80.62% 90.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Atriplex muricata
Chromolaena laevigata
Crinum asiaticum
Crotalaria crispata
Haplopappus deserticola
Hesperocyparis arizonica
Seriphidium junceum
Viburnum lantana

Cross-Links

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PubChem 101529183
NPASS NPC65428
LOTUS LTS0160600
wikiData Q105176226