Lycoperoside F

Details

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Internal ID 20de78de-0665-4a27-ad74-7d4316e58f53
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [(1R,2S,3'R,4S,5'S,6R,7S,8R,9S,12S,13S,16S,18S)-16-[(2R,3R,4R,5R,6R)-3,4-dihydroxy-5-[(2S,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-6-(hydroxymethyl)oxan-2-yl]oxy-7,9,13-trimethyl-5'-[[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]spiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-3'-yl] acetate
SMILES (Canonical) CC1C2C(CC3C2(CCC4C3CCC5C4(CCC(C5)OC6C(C(C(C(O6)CO)OC7C(C(C(C(O7)CO)O)OC8C(C(C(CO8)O)O)O)OC9C(C(C(C(O9)CO)O)O)O)O)O)C)C)OC11C(CC(CN1)COC1C(C(C(C(O1)CO)O)O)O)OC(=O)C
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](C[C@@H]3[C@@]2(CC[C@H]4[C@H]3CC[C@@H]5[C@@]4(CC[C@@H](C5)O[C@H]6[C@@H]([C@H]([C@H]([C@H](O6)CO)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)O)O)C)C)O[C@@]11[C@@H](C[C@@H](CN1)CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O)OC(=O)C
InChI InChI=1S/C58H95NO29/c1-21-36-30(88-58(21)35(79-22(2)64)11-23(14-59-58)19-77-51-45(74)41(70)38(67)31(15-60)81-51)13-28-26-6-5-24-12-25(7-9-56(24,3)27(26)8-10-57(28,36)4)80-53-47(76)43(72)48(34(18-63)84-53)85-55-50(87-54-46(75)42(71)39(68)32(16-61)82-54)49(40(69)33(17-62)83-55)86-52-44(73)37(66)29(65)20-78-52/h21,23-55,59-63,65-76H,5-20H2,1-4H3/t21-,23-,24-,25-,26+,27-,28-,29+,30-,31+,32+,33+,34+,35+,36-,37-,38+,39+,40+,41-,42-,43+,44+,45+,46+,47+,48-,49-,50+,51+,52-,53+,54-,55-,56-,57-,58+/m0/s1
InChI Key VSQBWNYALURFOT-YIDLYIHNSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C58H95NO29
Molecular Weight 1270.40 g/mol
Exact Mass 1269.59897599 g/mol
Topological Polar Surface Area (TPSA) 464.00 Ų
XlogP -3.90
Atomic LogP (AlogP) -6.36
H-Bond Acceptor 30
H-Bond Donor 17
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Lycoperoside F

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5896 58.96%
Caco-2 - 0.8700 87.00%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.5684 56.84%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8745 87.45%
OATP1B3 inhibitior + 0.9471 94.71%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.8354 83.54%
P-glycoprotein inhibitior + 0.7438 74.38%
P-glycoprotein substrate + 0.6669 66.69%
CYP3A4 substrate + 0.7586 75.86%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8746 87.46%
CYP3A4 inhibition - 0.9409 94.09%
CYP2C9 inhibition - 0.9396 93.96%
CYP2C19 inhibition - 0.9166 91.66%
CYP2D6 inhibition - 0.9347 93.47%
CYP1A2 inhibition - 0.9426 94.26%
CYP2C8 inhibition + 0.7530 75.30%
CYP inhibitory promiscuity - 0.8451 84.51%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5963 59.63%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.8998 89.98%
Skin irritation - 0.7383 73.83%
Skin corrosion - 0.9347 93.47%
Ames mutagenesis - 0.6878 68.78%
Human Ether-a-go-go-Related Gene inhibition + 0.8109 81.09%
Micronuclear + 0.6000 60.00%
Hepatotoxicity - 0.8750 87.50%
skin sensitisation - 0.8686 86.86%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity - 0.9483 94.83%
Acute Oral Toxicity (c) III 0.5670 56.70%
Estrogen receptor binding + 0.8399 83.99%
Androgen receptor binding + 0.6904 69.04%
Thyroid receptor binding + 0.5608 56.08%
Glucocorticoid receptor binding + 0.7520 75.20%
Aromatase binding + 0.7042 70.42%
PPAR gamma + 0.8113 81.13%
Honey bee toxicity - 0.5743 57.43%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6155 61.55%
Fish aquatic toxicity - 0.5182 51.82%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.41% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.70% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 97.42% 96.61%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.96% 94.45%
CHEMBL204 P00734 Thrombin 96.80% 96.01%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.68% 97.09%
CHEMBL220 P22303 Acetylcholinesterase 96.28% 94.45%
CHEMBL237 P41145 Kappa opioid receptor 95.98% 98.10%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.34% 97.25%
CHEMBL233 P35372 Mu opioid receptor 92.10% 97.93%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.50% 96.21%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.00% 100.00%
CHEMBL5255 O00206 Toll-like receptor 4 90.83% 92.50%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 90.79% 89.05%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 90.54% 95.50%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 89.78% 96.77%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 89.24% 95.58%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 89.17% 85.14%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.13% 92.94%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 88.10% 93.04%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 87.16% 97.86%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 86.67% 91.24%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.88% 89.00%
CHEMBL4581 P52732 Kinesin-like protein 1 85.29% 93.18%
CHEMBL340 P08684 Cytochrome P450 3A4 84.88% 91.19%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.43% 94.00%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 84.40% 98.75%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.13% 95.89%
CHEMBL2996 Q05655 Protein kinase C delta 84.08% 97.79%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 83.70% 95.36%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 83.68% 94.33%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.57% 100.00%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 80.71% 82.50%
CHEMBL226 P30542 Adenosine A1 receptor 80.70% 95.93%
CHEMBL1075317 P61964 WD repeat-containing protein 5 80.26% 96.33%
CHEMBL5028 O14672 ADAM10 80.24% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum lycopersicum

Cross-Links

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PubChem 21577181
NPASS NPC209704