Lucidamine A

Details

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Internal ID 1d21f0b5-4555-4d29-a5e4-0f81644e0459
Taxonomy Alkaloids and derivatives > Benzophenanthridine alkaloids > Dihydrobenzophenanthridine alkaloids
IUPAC Name 1-[(6S)-2,3-dihydroxy-7,8-dimethoxy-5-methyl-6H-benzo[c]phenanthridin-6-yl]propan-2-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C23H23NO5/c1-12(25)9-17-21-14(7-8-20(28-3)23(21)29-4)15-6-5-13-10-18(26)19(27)11-16(13)22(15)24(17)2/h5-8,10-11,17,26-27H,9H2,1-4H3/t17-/m0/s1
InChI Key OZFFCUIRRDOAHH-KRWDZBQOSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C23H23NO5
Molecular Weight 393.40 g/mol
Exact Mass 393.15762283 g/mol
Topological Polar Surface Area (TPSA) 79.20 Ų
XlogP 3.40
Atomic LogP (AlogP) 4.41
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

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1-((6S)-2,3-dihydroxy-7,8-dimethoxy-5-methyl-6H-benzo(c)phenanthridin-6-yl)propan-2-one
1-[(6S)-2,3-dihydroxy-7,8-dimethoxy-5-methyl-6H-benzo[c]phenanthridin-6-yl]propan-2-one
RefChem:154206
956012-27-4
CHEMBL399861

2D Structure

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2D Structure of Lucidamine A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8783 87.83%
Caco-2 + 0.7072 70.72%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Nucleus 0.4260 42.60%
OATP2B1 inhibitior - 0.8604 86.04%
OATP1B1 inhibitior + 0.8978 89.78%
OATP1B3 inhibitior + 0.9387 93.87%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.9034 90.34%
P-glycoprotein inhibitior + 0.6454 64.54%
P-glycoprotein substrate + 0.6683 66.83%
CYP3A4 substrate + 0.6060 60.60%
CYP2C9 substrate - 0.8000 80.00%
CYP2D6 substrate + 0.4752 47.52%
CYP3A4 inhibition - 0.5290 52.90%
CYP2C9 inhibition - 0.7497 74.97%
CYP2C19 inhibition - 0.6427 64.27%
CYP2D6 inhibition + 0.5231 52.31%
CYP1A2 inhibition - 0.5064 50.64%
CYP2C8 inhibition + 0.5768 57.68%
CYP inhibitory promiscuity - 0.8051 80.51%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5521 55.21%
Eye corrosion - 0.9919 99.19%
Eye irritation - 0.9122 91.22%
Skin irritation - 0.8107 81.07%
Skin corrosion - 0.9510 95.10%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6598 65.98%
Micronuclear + 0.6200 62.00%
Hepatotoxicity - 0.5352 53.52%
skin sensitisation - 0.9004 90.04%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8000 80.00%
Nephrotoxicity - 0.8962 89.62%
Acute Oral Toxicity (c) III 0.7536 75.36%
Estrogen receptor binding + 0.8671 86.71%
Androgen receptor binding + 0.7862 78.62%
Thyroid receptor binding + 0.6438 64.38%
Glucocorticoid receptor binding + 0.7837 78.37%
Aromatase binding + 0.5603 56.03%
PPAR gamma + 0.7658 76.58%
Honey bee toxicity - 0.9086 90.86%
Biodegradation - 0.9750 97.50%
Crustacea aquatic toxicity - 0.6255 62.55%
Fish aquatic toxicity + 0.8424 84.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.44% 96.09%
CHEMBL2581 P07339 Cathepsin D 94.08% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 92.91% 91.49%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 91.36% 89.62%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 91.09% 94.00%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 90.68% 80.78%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.46% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.68% 99.17%
CHEMBL4208 P20618 Proteasome component C5 89.04% 90.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.95% 91.11%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.60% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.07% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.01% 89.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.91% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia lucida

Cross-Links

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PubChem 23656474
NPASS NPC17677
ChEMBL CHEMBL399861
LOTUS LTS0018264
wikiData Q105203741