Longipedunin B

Details

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Internal ID 717e37a9-d65d-481d-a402-dda5326fc792
Taxonomy Phenylpropanoids and polyketides > Tannins > Hydrolyzable tannins
IUPAC Name [(9R,10R,11R)-3-hydroxy-4,5,19-trimethoxy-9,10-dimethyl-15,17-dioxatetracyclo[10.7.0.02,7.014,18]nonadeca-1(19),2,4,6,12,14(18)-hexaen-11-yl] propanoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H30O8/c1-7-18(26)33-22-13(3)12(2)8-14-9-16(28-4)23(29-5)21(27)19(14)20-15(22)10-17-24(25(20)30-6)32-11-31-17/h9-10,12-13,22,27H,7-8,11H2,1-6H3/t12-,13-,22-/m1/s1
InChI Key DFSWEHCESAAJRE-GIYNXVAASA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C25H30O8
Molecular Weight 458.50 g/mol
Exact Mass 458.19406791 g/mol
Topological Polar Surface Area (TPSA) 92.70 Ų
XlogP 4.70
Atomic LogP (AlogP) 4.64
H-Bond Acceptor 8
H-Bond Donor 1
Rotatable Bonds 5

Synonyms

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886441-73-2
LongipeduninB
Longepidunin B
(hydroxy-trimethoxy-dimethyl-[?]yl) propanoate
[(9R,10R,11R)-3-hydroxy-4,5,19-trimethoxy-9,10-dimethyl-15,17-dioxatetracyclo[10.7.0.02,7.014,18]nonadeca-1(19),2,4,6,12,14(18)-hexaen-11-yl] propanoate
Benzo[3',4']cycloocta[1',2':4,5]benzo[1,2-d][1,3]dioxole-1,8-diol, 5,6,7,8-tetrahydro-2,3,13-trimethoxy-6,7-dimethyl-, 8-propanoate, (6R,7R,8R)-

2D Structure

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2D Structure of Longipedunin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9833 98.33%
Caco-2 + 0.7157 71.57%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.6500 65.00%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8595 85.95%
OATP1B3 inhibitior + 0.8971 89.71%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.9746 97.46%
P-glycoprotein inhibitior + 0.8280 82.80%
P-glycoprotein substrate - 0.5473 54.73%
CYP3A4 substrate + 0.6485 64.85%
CYP2C9 substrate - 0.7891 78.91%
CYP2D6 substrate - 0.7930 79.30%
CYP3A4 inhibition + 0.5161 51.61%
CYP2C9 inhibition + 0.7346 73.46%
CYP2C19 inhibition + 0.6790 67.90%
CYP2D6 inhibition - 0.7412 74.12%
CYP1A2 inhibition - 0.6983 69.83%
CYP2C8 inhibition + 0.7023 70.23%
CYP inhibitory promiscuity + 0.6717 67.17%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.4844 48.44%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9065 90.65%
Skin irritation - 0.7957 79.57%
Skin corrosion - 0.9621 96.21%
Ames mutagenesis - 0.6554 65.54%
Human Ether-a-go-go-Related Gene inhibition - 0.4591 45.91%
Micronuclear - 0.5126 51.26%
Hepatotoxicity - 0.7072 70.72%
skin sensitisation - 0.7710 77.10%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity - 0.9072 90.72%
Acute Oral Toxicity (c) III 0.4627 46.27%
Estrogen receptor binding + 0.8483 84.83%
Androgen receptor binding - 0.5156 51.56%
Thyroid receptor binding + 0.6973 69.73%
Glucocorticoid receptor binding + 0.8634 86.34%
Aromatase binding + 0.5471 54.71%
PPAR gamma + 0.7556 75.56%
Honey bee toxicity - 0.7329 73.29%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5349 53.49%
Fish aquatic toxicity + 0.9809 98.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.29% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.18% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.04% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.19% 99.17%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 92.94% 96.77%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.31% 89.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 91.93% 92.62%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 90.86% 96.95%
CHEMBL2413 P32246 C-C chemokine receptor type 1 88.99% 89.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.62% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.46% 86.33%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 83.68% 85.14%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 83.63% 94.80%
CHEMBL5311 P37023 Serine/threonine-protein kinase receptor R3 82.50% 82.67%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.79% 97.25%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 80.97% 97.21%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.45% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Helenium autumnale

Cross-Links

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PubChem 11698256
NPASS NPC287779