Liposidomycin M-(III)

Details

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Internal ID f478c606-3733-4a2e-9069-598a9cbe33a0
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Dipeptides
IUPAC Name 2-[[5-(aminomethyl)-3,4-dihydroxyoxolan-2-yl]oxy-[5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl]-6-[3-(4-carboxy-3-methylbutanoyl)oxyhexadecanoyloxy]-1,4-dimethyl-3-oxo-1,4-diazepane-5-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C44H71N5O18/c1-5-6-7-8-9-10-11-12-13-14-15-16-25(63-30(53)20-24(2)19-29(51)52)21-31(54)64-27-23-47(3)33(40(59)48(4)32(27)42(60)61)38(67-43-37(58)34(55)26(22-45)65-43)39-35(56)36(57)41(66-39)49-18-17-28(50)46-44(49)62/h17-18,24-27,32-39,41,43,55-58H,5-16,19-23,45H2,1-4H3,(H,51,52)(H,60,61)(H,46,50,62)
InChI Key JOJGOQZCIUYMNK-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C44H71N5O18
Molecular Weight 958.10 g/mol
Exact Mass 957.47941043 g/mol
Topological Polar Surface Area (TPSA) 335.00 Ų
XlogP -2.80
Atomic LogP (AlogP) -0.41
H-Bond Acceptor 19
H-Bond Donor 8
Rotatable Bonds 27

Synonyms

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CHEBI:203467
2-[[5-(aminomethyl)-3,4-dihydroxyoxolan-2-yl]oxy-[5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl]-6-[3-(4-carboxy-3-methylbutanoyl)oxyhexadecanoyloxy]-1,4-dimethyl-3-oxo-1,4-diazepane-5-carboxylic acid

2D Structure

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2D Structure of Liposidomycin M-(III)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5798 57.98%
Caco-2 - 0.8608 86.08%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Lysosomes 0.4799 47.99%
OATP2B1 inhibitior - 0.8629 86.29%
OATP1B1 inhibitior + 0.8456 84.56%
OATP1B3 inhibitior + 0.9304 93.04%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8561 85.61%
BSEP inhibitior + 0.8858 88.58%
P-glycoprotein inhibitior + 0.7435 74.35%
P-glycoprotein substrate + 0.7694 76.94%
CYP3A4 substrate + 0.7249 72.49%
CYP2C9 substrate - 0.7993 79.93%
CYP2D6 substrate - 0.8542 85.42%
CYP3A4 inhibition - 0.6540 65.40%
CYP2C9 inhibition - 0.8304 83.04%
CYP2C19 inhibition - 0.8762 87.62%
CYP2D6 inhibition - 0.8554 85.54%
CYP1A2 inhibition - 0.8614 86.14%
CYP2C8 inhibition + 0.6720 67.20%
CYP inhibitory promiscuity - 0.9355 93.55%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.6193 61.93%
Eye corrosion - 0.9844 98.44%
Eye irritation - 0.9023 90.23%
Skin irritation - 0.7803 78.03%
Skin corrosion - 0.9299 92.99%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6577 65.77%
Micronuclear + 0.8700 87.00%
Hepatotoxicity + 0.5427 54.27%
skin sensitisation - 0.8677 86.77%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.7091 70.91%
Acute Oral Toxicity (c) III 0.6005 60.05%
Estrogen receptor binding + 0.8399 83.99%
Androgen receptor binding + 0.7389 73.89%
Thyroid receptor binding + 0.5729 57.29%
Glucocorticoid receptor binding + 0.7037 70.37%
Aromatase binding + 0.6220 62.20%
PPAR gamma + 0.7757 77.57%
Honey bee toxicity - 0.7413 74.13%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5660 56.60%
Fish aquatic toxicity + 0.6575 65.75%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.65% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.39% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 98.08% 90.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.85% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.38% 99.17%
CHEMBL3359 P21462 Formyl peptide receptor 1 92.78% 93.56%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 92.26% 100.00%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 92.07% 93.00%
CHEMBL5255 O00206 Toll-like receptor 4 91.94% 92.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.82% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.43% 91.11%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.02% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 88.12% 96.47%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 88.07% 95.00%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 86.67% 92.86%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 85.88% 90.71%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.82% 97.09%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.65% 100.00%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 84.33% 94.08%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.79% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.49% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 82.78% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.58% 99.23%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 81.39% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 101249985
LOTUS LTS0122557
wikiData Q77377925