leucoridine D

Details

Top
Internal ID 5de8b58b-7116-47c9-a180-359e87fd3b29
Taxonomy Alkaloids and derivatives > Strychnos alkaloids
IUPAC Name (1S,9S,11S,12S,17S)-12-ethyl-6-[[(1R,10S,11S,12S,17S)-12-ethyl-8,14-diazapentacyclo[9.5.2.01,9.02,7.014,17]octadeca-2,4,6,8-tetraen-10-yl]methyl]-10-methylidene-8,14-diazapentacyclo[9.5.2.01,9.02,7.014,17]octadeca-2,4,6-triene
SMILES (Canonical) CCC1CN2CCC34C2CC1C(C3=NC5=CC=CC=C45)CC6=C7C(=CC=C6)C89CCN1C8CC(C(C1)CC)C(=C)C9N7
SMILES (Isomeric) CC[C@@H]1CN2CC[C@@]34[C@@H]2C[C@@H]1[C@@H](C3=NC5=CC=CC=C45)CC6=C7C(=CC=C6)[C@]89CCN1[C@H]8C[C@@H]([C@@H](C1)CC)C(=C)[C@@H]9N7
InChI InChI=1S/C38H46N4/c1-4-23-20-41-16-14-38-30-11-8-9-25(34(30)40-35(38)22(3)26(23)18-32(38)41)17-28-27-19-33-37(13-15-42(33)21-24(27)5-2)29-10-6-7-12-31(29)39-36(28)37/h6-12,23-24,26-28,32-33,35,40H,3-5,13-21H2,1-2H3/t23-,24-,26-,27+,28+,32+,33+,35+,37-,38-/m1/s1
InChI Key ZOKATMGICWFWCT-SYZQWITBSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C38H46N4
Molecular Weight 558.80 g/mol
Exact Mass 558.37224748 g/mol
Topological Polar Surface Area (TPSA) 30.90 Ų
XlogP 6.10
Atomic LogP (AlogP) 6.73
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 4

Synonyms

Top
CHEMBL1164917

2D Structure

Top
2D Structure of leucoridine D

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9505 95.05%
Caco-2 - 0.7662 76.62%
Blood Brain Barrier + 0.9750 97.50%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Lysosomes 0.3973 39.73%
OATP2B1 inhibitior + 0.5718 57.18%
OATP1B1 inhibitior + 0.9027 90.27%
OATP1B3 inhibitior + 0.9407 94.07%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior + 0.6750 67.50%
BSEP inhibitior + 0.9894 98.94%
P-glycoprotein inhibitior + 0.8661 86.61%
P-glycoprotein substrate + 0.8020 80.20%
CYP3A4 substrate + 0.6902 69.02%
CYP2C9 substrate - 0.6173 61.73%
CYP2D6 substrate + 0.3703 37.03%
CYP3A4 inhibition - 0.7105 71.05%
CYP2C9 inhibition - 0.8084 80.84%
CYP2C19 inhibition - 0.7850 78.50%
CYP2D6 inhibition + 0.6231 62.31%
CYP1A2 inhibition - 0.7740 77.40%
CYP2C8 inhibition + 0.6969 69.69%
CYP inhibitory promiscuity - 0.7080 70.80%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.7244 72.44%
Eye corrosion - 0.9857 98.57%
Eye irritation - 0.9508 95.08%
Skin irritation - 0.7464 74.64%
Skin corrosion - 0.8938 89.38%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.9368 93.68%
Micronuclear - 0.5100 51.00%
Hepatotoxicity + 0.5500 55.00%
skin sensitisation - 0.8047 80.47%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity + 0.6147 61.47%
Acute Oral Toxicity (c) III 0.5038 50.38%
Estrogen receptor binding + 0.8389 83.89%
Androgen receptor binding + 0.7858 78.58%
Thyroid receptor binding + 0.5581 55.81%
Glucocorticoid receptor binding + 0.6562 65.62%
Aromatase binding + 0.6404 64.04%
PPAR gamma + 0.6387 63.87%
Honey bee toxicity - 0.7398 73.98%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9960 99.60%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.22% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 98.49% 90.17%
CHEMBL240 Q12809 HERG 96.85% 89.76%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.45% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.25% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.96% 94.45%
CHEMBL2581 P07339 Cathepsin D 93.23% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 90.54% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.33% 86.33%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.82% 91.11%
CHEMBL238 Q01959 Dopamine transporter 88.39% 95.88%
CHEMBL1937 Q92769 Histone deacetylase 2 88.09% 94.75%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 87.28% 89.62%
CHEMBL228 P31645 Serotonin transporter 87.17% 95.51%
CHEMBL222 P23975 Norepinephrine transporter 86.37% 96.06%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.37% 82.69%
CHEMBL233 P35372 Mu opioid receptor 84.85% 97.93%
CHEMBL3902 P09211 Glutathione S-transferase Pi 84.00% 93.81%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 83.70% 97.64%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.57% 92.62%
CHEMBL255 P29275 Adenosine A2b receptor 82.94% 98.59%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.90% 100.00%
CHEMBL2095226 P05556 Integrin alpha-5/beta-1 81.76% 96.39%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.71% 95.56%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 81.01% 93.10%
CHEMBL3310 Q96DB2 Histone deacetylase 11 80.05% 88.56%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Leuconotis griffithii

Cross-Links

Top
PubChem 46898053
LOTUS LTS0106567
wikiData Q105380546