Lethedoside A

Details

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Internal ID 49affaa2-e835-4a1b-a325-4070a95fc4fa
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides
IUPAC Name 2-(3,4-dimethoxyphenyl)-7-methoxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
SMILES (Canonical) COC1=C(C=C(C=C1)C2=CC(=O)C3=C(O2)C=C(C=C3OC4C(C(C(C(O4)CO)O)O)O)OC)OC
SMILES (Isomeric) COC1=C(C=C(C=C1)C2=CC(=O)C3=C(O2)C=C(C=C3O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)OC)OC
InChI InChI=1S/C24H26O11/c1-30-12-7-17-20(18(8-12)34-24-23(29)22(28)21(27)19(10-25)35-24)13(26)9-15(33-17)11-4-5-14(31-2)16(6-11)32-3/h4-9,19,21-25,27-29H,10H2,1-3H3/t19-,21-,22+,23-,24-/m1/s1
InChI Key VCKHKFVWKVWGMH-PFKOEMKTSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C24H26O11
Molecular Weight 490.50 g/mol
Exact Mass 490.14751164 g/mol
Topological Polar Surface Area (TPSA) 153.00 Ų
XlogP 0.90
Atomic LogP (AlogP) 0.66
H-Bond Acceptor 11
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

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221289-20-9
2-(3,4-dimethoxyphenyl)-7-methoxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
CHEMBL454822
AKOS032948176
2-(3,4-Dimethoxyphenyl)-5-(-D-glucopyranosyloxy)-7-methoxy-4H-1-benzopyran-4-one

2D Structure

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2D Structure of Lethedoside A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5088 50.88%
Caco-2 - 0.8150 81.50%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.6030 60.30%
OATP2B1 inhibitior - 0.8442 84.42%
OATP1B1 inhibitior + 0.9018 90.18%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.7484 74.84%
P-glycoprotein inhibitior + 0.6597 65.97%
P-glycoprotein substrate - 0.6869 68.69%
CYP3A4 substrate + 0.5760 57.60%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8291 82.91%
CYP3A4 inhibition - 0.9371 93.71%
CYP2C9 inhibition - 0.9410 94.10%
CYP2C19 inhibition - 0.9438 94.38%
CYP2D6 inhibition - 0.9518 95.18%
CYP1A2 inhibition - 0.9134 91.34%
CYP2C8 inhibition + 0.6004 60.04%
CYP inhibitory promiscuity - 0.7474 74.74%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7050 70.50%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.9140 91.40%
Skin irritation - 0.8406 84.06%
Skin corrosion - 0.9638 96.38%
Ames mutagenesis + 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7205 72.05%
Micronuclear + 0.6433 64.33%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9409 94.09%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.7801 78.01%
Acute Oral Toxicity (c) III 0.6685 66.85%
Estrogen receptor binding + 0.8252 82.52%
Androgen receptor binding + 0.6368 63.68%
Thyroid receptor binding + 0.5803 58.03%
Glucocorticoid receptor binding + 0.7119 71.19%
Aromatase binding - 0.4840 48.40%
PPAR gamma + 0.7263 72.63%
Honey bee toxicity - 0.7754 77.54%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7349 73.49%
Fish aquatic toxicity + 0.7605 76.05%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.35% 85.14%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 96.64% 94.00%
CHEMBL2581 P07339 Cathepsin D 94.13% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.91% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.79% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.48% 89.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 92.42% 86.92%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.43% 86.33%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 89.74% 96.21%
CHEMBL220 P22303 Acetylcholinesterase 89.69% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.58% 95.56%
CHEMBL3714130 P46095 G-protein coupled receptor 6 88.17% 97.36%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.99% 96.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.70% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 84.87% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.07% 99.17%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 83.53% 95.78%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.42% 97.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.33% 92.94%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Aquilaria sinensis
Lethedon tannensis

Cross-Links

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PubChem 10390853
NPASS NPC182045
LOTUS LTS0068803
wikiData Q105283751