Lethedioside B

Details

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Internal ID b9584bff-68fa-4ae6-8e12-2fb1fee0a8c4
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides
IUPAC Name 7-methoxy-5-[(2S,4S,5S)-3,4,5-trihydroxy-6-[[(2S,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxy-2-(3,4,5-trimethoxyphenyl)chromen-4-one
SMILES (Canonical) COC1=CC2=C(C(=C1)OC3C(C(C(C(O3)COC4C(C(C(CO4)O)O)O)O)O)O)C(=O)C=C(O2)C5=CC(=C(C(=C5)OC)OC)OC
SMILES (Isomeric) COC1=CC2=C(C(=C1)O[C@H]3C([C@H]([C@@H](C(O3)CO[C@H]4C([C@H]([C@@H](CO4)O)O)O)O)O)O)C(=O)C=C(O2)C5=CC(=C(C(=C5)OC)OC)OC
InChI InChI=1S/C30H36O16/c1-38-13-7-17-22(14(31)9-16(44-17)12-5-19(39-2)28(41-4)20(6-12)40-3)18(8-13)45-30-27(37)25(35)24(34)21(46-30)11-43-29-26(36)23(33)15(32)10-42-29/h5-9,15,21,23-27,29-30,32-37H,10-11H2,1-4H3/t15-,21?,23+,24-,25+,26?,27?,29+,30-/m1/s1
InChI Key YCCFHELFYKTGSO-IMWYKUOISA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C30H36O16
Molecular Weight 652.60 g/mol
Exact Mass 652.20033506 g/mol
Topological Polar Surface Area (TPSA) 222.00 Ų
XlogP -1.20
Atomic LogP (AlogP) -0.86
H-Bond Acceptor 16
H-Bond Donor 6
Rotatable Bonds 10

Synonyms

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Tricetin 7,3',4',5'-trimethyl eter 5-xylosyl-(1->6)-glucoside
LMPK12111068

2D Structure

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2D Structure of Lethedioside B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5725 57.25%
Caco-2 - 0.8644 86.44%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.6292 62.92%
OATP2B1 inhibitior - 0.5790 57.90%
OATP1B1 inhibitior + 0.8745 87.45%
OATP1B3 inhibitior + 0.9356 93.56%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.7601 76.01%
P-glycoprotein inhibitior + 0.6097 60.97%
P-glycoprotein substrate - 0.5310 53.10%
CYP3A4 substrate + 0.6392 63.92%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8241 82.41%
CYP3A4 inhibition - 0.9614 96.14%
CYP2C9 inhibition - 0.9537 95.37%
CYP2C19 inhibition - 0.9382 93.82%
CYP2D6 inhibition - 0.9374 93.74%
CYP1A2 inhibition - 0.9184 91.84%
CYP2C8 inhibition + 0.5613 56.13%
CYP inhibitory promiscuity - 0.8791 87.91%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6942 69.42%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9230 92.30%
Skin irritation - 0.8485 84.85%
Skin corrosion - 0.9632 96.32%
Ames mutagenesis + 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8348 83.48%
Micronuclear + 0.6174 61.74%
Hepatotoxicity - 0.8500 85.00%
skin sensitisation - 0.9243 92.43%
Respiratory toxicity - 0.5889 58.89%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.9403 94.03%
Acute Oral Toxicity (c) III 0.6930 69.30%
Estrogen receptor binding + 0.8403 84.03%
Androgen receptor binding + 0.5741 57.41%
Thyroid receptor binding + 0.5450 54.50%
Glucocorticoid receptor binding + 0.6757 67.57%
Aromatase binding + 0.5972 59.72%
PPAR gamma + 0.7173 71.73%
Honey bee toxicity - 0.7453 74.53%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.7849 78.49%
Fish aquatic toxicity + 0.8517 85.17%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.59% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.56% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 96.56% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.29% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.23% 96.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 93.07% 96.77%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.78% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.72% 97.09%
CHEMBL4040 P28482 MAP kinase ERK2 88.62% 83.82%
CHEMBL2581 P07339 Cathepsin D 88.61% 98.95%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 87.51% 86.92%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.33% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 86.90% 92.62%
CHEMBL220 P22303 Acetylcholinesterase 86.43% 94.45%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 83.54% 95.83%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.06% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.95% 99.17%
CHEMBL4208 P20618 Proteasome component C5 81.75% 90.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 81.59% 95.50%
CHEMBL3401 O75469 Pregnane X receptor 81.29% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.08% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lethedon tannensis

Cross-Links

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PubChem 44258397
LOTUS LTS0176918
wikiData Q105346192