Lapidin

Details

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Internal ID b9f98b71-1277-490b-a78b-a0bea8354b76
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Sesquiterpenoids
IUPAC Name [(3R,3aS,4S,8aS)-3-hydroxy-6,8a-dimethyl-8-oxo-3-propan-2-yl-2,3a,4,5-tetrahydro-1H-azulen-4-yl] (E)-2-methylbut-2-enoate
SMILES (Canonical) CC=C(C)C(=O)OC1CC(=CC(=O)C2(C1C(CC2)(C(C)C)O)C)C
SMILES (Isomeric) C/C=C(\C)/C(=O)O[C@H]1CC(=CC(=O)[C@@]2([C@@H]1[C@@](CC2)(C(C)C)O)C)C
InChI InChI=1S/C20H30O4/c1-7-14(5)18(22)24-15-10-13(4)11-16(21)19(6)8-9-20(23,12(2)3)17(15)19/h7,11-12,15,17,23H,8-10H2,1-6H3/b14-7+/t15-,17+,19+,20+/m0/s1
InChI Key YMWBTMBPEHUMBA-FAKHFBMMSA-N
Popularity 17 references in papers

Physical and Chemical Properties

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Molecular Formula C20H30O4
Molecular Weight 334.40 g/mol
Exact Mass 334.21440943 g/mol
Topological Polar Surface Area (TPSA) 63.60 Ų
XlogP 3.30
Atomic LogP (AlogP) 3.59
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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Lapidine
[(3R,3aS,4S,8aS)-3-hydroxy-6,8a-dimethyl-8-oxo-3-propan-2-yl-2,3a,4,5-tetrahydro-1H-azulen-4-yl] (E)-2-methylbut-2-enoate
CHEMBL2165595
(3R,3aS,4S,8aS)-3-hydroxy-6,8a-dimethyl-8-oxo-3-(propan-2-yl)-1,2,3,3a,4,5,8,8a-octahydroazulen-4-yl (2E)-2-methylbut-2-enoate
STL564737
AKOS030489106

2D Structure

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2D Structure of Lapidin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9888 98.88%
Caco-2 + 0.8148 81.48%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.7154 71.54%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9058 90.58%
OATP1B3 inhibitior + 0.7969 79.69%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.7321 73.21%
BSEP inhibitior - 0.5509 55.09%
P-glycoprotein inhibitior - 0.6588 65.88%
P-glycoprotein substrate - 0.6892 68.92%
CYP3A4 substrate + 0.6238 62.38%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9188 91.88%
CYP3A4 inhibition - 0.8819 88.19%
CYP2C9 inhibition - 0.5816 58.16%
CYP2C19 inhibition - 0.7259 72.59%
CYP2D6 inhibition - 0.9514 95.14%
CYP1A2 inhibition - 0.5594 55.94%
CYP2C8 inhibition - 0.8443 84.43%
CYP inhibitory promiscuity - 0.9626 96.26%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5997 59.97%
Eye corrosion - 0.9871 98.71%
Eye irritation - 0.9310 93.10%
Skin irritation + 0.6107 61.07%
Skin corrosion - 0.9159 91.59%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6862 68.62%
Micronuclear - 0.7900 79.00%
Hepatotoxicity + 0.6167 61.67%
skin sensitisation - 0.6766 67.66%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity + 0.7200 72.00%
Acute Oral Toxicity (c) II 0.4142 41.42%
Estrogen receptor binding + 0.6689 66.89%
Androgen receptor binding + 0.5748 57.48%
Thyroid receptor binding + 0.6701 67.01%
Glucocorticoid receptor binding + 0.6729 67.29%
Aromatase binding - 0.5788 57.88%
PPAR gamma + 0.5668 56.68%
Honey bee toxicity - 0.7378 73.78%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9809 98.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.58% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.91% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.41% 96.09%
CHEMBL2581 P07339 Cathepsin D 93.05% 98.95%
CHEMBL221 P23219 Cyclooxygenase-1 92.38% 90.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.02% 95.56%
CHEMBL1937 Q92769 Histone deacetylase 2 88.75% 94.75%
CHEMBL284 P27487 Dipeptidyl peptidase IV 85.57% 95.69%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.11% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.11% 99.23%
CHEMBL340 P08684 Cytochrome P450 3A4 82.41% 91.19%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.87% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 80.78% 96.47%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ferula communis subsp. linkii
Ferula lapidosa
Ferula latipinna
Ferula ovina

Cross-Links

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PubChem 11872435
LOTUS LTS0024946
wikiData Q104402364