Landomycin R

Details

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Internal ID ddc9246e-4ffd-4809-9877-8dad88153b76
Taxonomy Phenylpropanoids and polyketides > Angucyclines
IUPAC Name 8-[(2S,4R,5S,6R)-5-[(2S,4R,5S,6R)-4,5-dihydroxy-6-methyloxan-2-yl]oxy-4-hydroxy-6-methyloxan-2-yl]oxy-1,11-dihydroxy-3-methylbenzo[a]anthracene-7,12-dione
SMILES (Canonical) CC1C(C(CC(O1)OC2C(OC(CC2O)OC3=C4C(=C(C=C3)O)C(=O)C5=C(C4=O)C=CC6=C5C(=CC(=C6)C)O)C)O)O
SMILES (Isomeric) C[C@@H]1[C@H]([C@@H](C[C@@H](O1)O[C@@H]2[C@H](O[C@H](C[C@H]2O)OC3=C4C(=C(C=C3)O)C(=O)C5=C(C4=O)C=CC6=C5C(=CC(=C6)C)O)C)O)O
InChI InChI=1S/C31H32O11/c1-12-8-15-4-5-16-25(24(15)18(33)9-12)30(38)26-17(32)6-7-21(27(26)29(16)37)41-22-11-20(35)31(14(3)40-22)42-23-10-19(34)28(36)13(2)39-23/h4-9,13-14,19-20,22-23,28,31-36H,10-11H2,1-3H3/t13-,14-,19-,20-,22+,23+,28-,31-/m1/s1
InChI Key NIYADHCAUUYEPB-YWQDWRTKSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C31H32O11
Molecular Weight 580.60 g/mol
Exact Mass 580.19446183 g/mol
Topological Polar Surface Area (TPSA) 172.00 Ų
XlogP 3.50
Atomic LogP (AlogP) 2.45
H-Bond Acceptor 11
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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CHEBI:70051
CHEMBL1668342
Q27138390

2D Structure

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2D Structure of Landomycin R

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8411 84.11%
Caco-2 - 0.8412 84.12%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.6548 65.48%
OATP2B1 inhibitior - 0.7121 71.21%
OATP1B1 inhibitior + 0.8905 89.05%
OATP1B3 inhibitior + 0.8663 86.63%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9353 93.53%
P-glycoprotein inhibitior - 0.4545 45.45%
P-glycoprotein substrate + 0.5850 58.50%
CYP3A4 substrate + 0.6467 64.67%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8429 84.29%
CYP3A4 inhibition - 0.9597 95.97%
CYP2C9 inhibition - 0.9716 97.16%
CYP2C19 inhibition - 0.9711 97.11%
CYP2D6 inhibition - 0.9666 96.66%
CYP1A2 inhibition - 0.7564 75.64%
CYP2C8 inhibition - 0.6195 61.95%
CYP inhibitory promiscuity - 0.9790 97.90%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5840 58.40%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9213 92.13%
Skin irritation - 0.7862 78.62%
Skin corrosion - 0.9484 94.84%
Ames mutagenesis + 0.6363 63.63%
Human Ether-a-go-go-Related Gene inhibition - 0.5000 50.00%
Micronuclear + 0.7300 73.00%
Hepatotoxicity + 0.6250 62.50%
skin sensitisation - 0.8868 88.68%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.7259 72.59%
Acute Oral Toxicity (c) III 0.5291 52.91%
Estrogen receptor binding + 0.8154 81.54%
Androgen receptor binding + 0.6456 64.56%
Thyroid receptor binding - 0.5162 51.62%
Glucocorticoid receptor binding + 0.6491 64.91%
Aromatase binding + 0.6059 60.59%
PPAR gamma + 0.7073 70.73%
Honey bee toxicity - 0.7841 78.41%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9277 92.77%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1951 P21397 Monoamine oxidase A 99.94% 91.49%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.31% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.84% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.57% 95.56%
CHEMBL2581 P07339 Cathepsin D 94.24% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.11% 94.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 93.79% 96.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 91.73% 99.23%
CHEMBL4208 P20618 Proteasome component C5 90.72% 90.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.09% 86.33%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.21% 99.15%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 87.33% 90.71%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 86.77% 96.67%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.68% 92.94%
CHEMBL3401 O75469 Pregnane X receptor 86.68% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.10% 97.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.04% 96.21%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 83.93% 97.21%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 83.06% 96.09%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 82.22% 83.00%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 81.40% 97.31%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 81.21% 95.78%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.11% 95.89%
CHEMBL340 P08684 Cytochrome P450 3A4 80.77% 91.19%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 50994832
LOTUS LTS0019926
wikiData Q27138390