methyl (4S,4aS,6S,7R,7aS)-6-[(1S,4aS,7S,7aS)-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carbonyl]oxy-7-methyl-3-oxo-4,4a,5,6,7,7a-hexahydro-1H-cyclopenta[c]pyran-4-carboxylate

Details

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Internal ID f53938c4-c50d-4073-8fc9-1e40c4562af0
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (4S,4aS,6S,7R,7aS)-6-[(1S,4aS,7S,7aS)-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carbonyl]oxy-7-methyl-3-oxo-4,4a,5,6,7,7a-hexahydro-1H-cyclopenta[c]pyran-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H38O13/c1-10-4-5-12-15(9-37-26(18(10)12)40-27-22(31)21(30)20(29)17(7-28)39-27)23(32)38-16-6-13-14(11(16)2)8-36-25(34)19(13)24(33)35-3/h9-14,16-22,26-31H,4-8H2,1-3H3/t10-,11+,12+,13-,14+,16-,17+,18-,19-,20+,21-,22+,26-,27-/m0/s1
InChI Key RYNMWHZLOPICQA-SCWHPQJBSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C27H38O13
Molecular Weight 570.60 g/mol
Exact Mass 570.23124126 g/mol
Topological Polar Surface Area (TPSA) 188.00 Ų
XlogP 1.20
Atomic LogP (AlogP) -0.76
H-Bond Acceptor 13
H-Bond Donor 4
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (4S,4aS,6S,7R,7aS)-6-[(1S,4aS,7S,7aS)-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carbonyl]oxy-7-methyl-3-oxo-4,4a,5,6,7,7a-hexahydro-1H-cyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5677 56.77%
Caco-2 - 0.8566 85.66%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7936 79.36%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7418 74.18%
OATP1B3 inhibitior + 0.9141 91.41%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.8003 80.03%
P-glycoprotein inhibitior - 0.4531 45.31%
P-glycoprotein substrate + 0.6156 61.56%
CYP3A4 substrate + 0.6962 69.62%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8853 88.53%
CYP3A4 inhibition - 0.8968 89.68%
CYP2C9 inhibition - 0.9222 92.22%
CYP2C19 inhibition - 0.8844 88.44%
CYP2D6 inhibition - 0.9352 93.52%
CYP1A2 inhibition - 0.8305 83.05%
CYP2C8 inhibition + 0.6178 61.78%
CYP inhibitory promiscuity - 0.9445 94.45%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6995 69.95%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9338 93.38%
Skin irritation - 0.6828 68.28%
Skin corrosion - 0.9532 95.32%
Ames mutagenesis - 0.6339 63.39%
Human Ether-a-go-go-Related Gene inhibition + 0.6710 67.10%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.6250 62.50%
skin sensitisation - 0.9223 92.23%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity + 0.5525 55.25%
Acute Oral Toxicity (c) III 0.4279 42.79%
Estrogen receptor binding + 0.7719 77.19%
Androgen receptor binding + 0.6661 66.61%
Thyroid receptor binding - 0.5820 58.20%
Glucocorticoid receptor binding + 0.5919 59.19%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.6104 61.04%
Honey bee toxicity - 0.7256 72.56%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9308 93.08%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.11% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 97.28% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.15% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.54% 97.09%
CHEMBL2581 P07339 Cathepsin D 93.46% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.77% 85.14%
CHEMBL5255 O00206 Toll-like receptor 4 90.15% 92.50%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 85.85% 94.80%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.57% 96.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.54% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.10% 86.33%
CHEMBL340 P08684 Cytochrome P450 3A4 84.05% 91.19%
CHEMBL226 P30542 Adenosine A1 receptor 81.74% 95.93%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.59% 97.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.09% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.07% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dipsacus laciniatus

Cross-Links

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PubChem 101419892
NPASS NPC110044
LOTUS LTS0258780
wikiData Q105247718