Kipukasin I

Details

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Internal ID 4063cb67-62c0-4176-ad57-51bffcc2f410
Taxonomy Nucleosides, nucleotides, and analogues > Pyrimidine nucleosides
IUPAC Name [(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] 4-hydroxy-2-methoxy-6-methylbenzoate
SMILES (Canonical) CC1=CC(=CC(=C1C(=O)OC2C(OC(C2O)N3C=CC(=O)NC3=O)CO)OC)O
SMILES (Isomeric) CC1=CC(=CC(=C1C(=O)O[C@@H]2[C@H](O[C@H]([C@@H]2O)N3C=CC(=O)NC3=O)CO)OC)O
InChI InChI=1S/C18H20N2O9/c1-8-5-9(22)6-10(27-2)13(8)17(25)29-15-11(7-21)28-16(14(15)24)20-4-3-12(23)19-18(20)26/h3-6,11,14-16,21-22,24H,7H2,1-2H3,(H,19,23,26)/t11-,14-,15-,16-/m1/s1
InChI Key LOUBNBRAJPSMEC-RAEVTNRLSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C18H20N2O9
Molecular Weight 408.40 g/mol
Exact Mass 408.11688022 g/mol
Topological Polar Surface Area (TPSA) 155.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.96
H-Bond Acceptor 10
H-Bond Donor 4
Rotatable Bonds 5

Synonyms

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(2R,3S,4R,5R)-5-(2,4-Dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-hydroxy-2-(hydroxymethyl)tetrahydrofuran-3-yl 4-hydroxy-2-methoxy-6-methylbenzoate
1175827-47-0

2D Structure

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2D Structure of Kipukasin I

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7741 77.41%
Caco-2 - 0.8171 81.71%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.5394 53.94%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8995 89.95%
OATP1B3 inhibitior + 0.9361 93.61%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.5266 52.66%
P-glycoprotein inhibitior - 0.5150 51.50%
P-glycoprotein substrate - 0.6958 69.58%
CYP3A4 substrate + 0.6298 62.98%
CYP2C9 substrate - 0.6083 60.83%
CYP2D6 substrate - 0.8707 87.07%
CYP3A4 inhibition - 0.6327 63.27%
CYP2C9 inhibition - 0.7601 76.01%
CYP2C19 inhibition - 0.7275 72.75%
CYP2D6 inhibition - 0.8880 88.80%
CYP1A2 inhibition - 0.9373 93.73%
CYP2C8 inhibition + 0.4799 47.99%
CYP inhibitory promiscuity - 0.7229 72.29%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.8100 81.00%
Carcinogenicity (trinary) Non-required 0.4978 49.78%
Eye corrosion - 0.9905 99.05%
Eye irritation - 0.9462 94.62%
Skin irritation - 0.8399 83.99%
Skin corrosion - 0.9573 95.73%
Ames mutagenesis - 0.6832 68.32%
Human Ether-a-go-go-Related Gene inhibition - 0.4469 44.69%
Micronuclear + 0.9800 98.00%
Hepatotoxicity + 0.6170 61.70%
skin sensitisation - 0.9177 91.77%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8000 80.00%
Nephrotoxicity - 0.7387 73.87%
Acute Oral Toxicity (c) III 0.6935 69.35%
Estrogen receptor binding + 0.5369 53.69%
Androgen receptor binding + 0.6577 65.77%
Thyroid receptor binding - 0.5511 55.11%
Glucocorticoid receptor binding + 0.5372 53.72%
Aromatase binding + 0.5838 58.38%
PPAR gamma + 0.5234 52.34%
Honey bee toxicity - 0.8254 82.54%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity - 0.4801 48.01%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.33% 96.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.88% 94.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 92.70% 86.92%
CHEMBL2581 P07339 Cathepsin D 92.33% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.19% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.43% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.32% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.68% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 88.93% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.91% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.91% 99.17%
CHEMBL3922 P50579 Methionine aminopeptidase 2 84.84% 97.28%
CHEMBL5925 P22413 Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 84.66% 92.38%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.31% 85.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.92% 95.89%
CHEMBL4208 P20618 Proteasome component C5 80.48% 90.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.15% 97.14%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.04% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 38353028
LOTUS LTS0009280
wikiData Q75052841