Kinamycin D

Details

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Internal ID b9af49df-a5e1-4056-9bbf-4438ad49cd47
Taxonomy Benzenoids > Naphthalenes > Naphthols and derivatives
IUPAC Name [(1R,2R,3R,4S)-1-acetyloxy-11-diazo-2,4,9-trihydroxy-2-methyl-5,10-dioxo-3,4-dihydro-1H-benzo[b]fluoren-3-yl] acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C22H18N2O9/c1-7(25)32-20-15-13(19(30)21(22(20,3)31)33-8(2)26)12-14(16(15)24-23)18(29)11-9(17(12)28)5-4-6-10(11)27/h4-6,19-21,27,30-31H,1-3H3/t19-,20+,21+,22+/m0/s1
InChI Key KPVVXTRWIKTJBS-DXBBTUNJSA-N
Popularity 13 references in papers

Physical and Chemical Properties

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Molecular Formula C22H18N2O9
Molecular Weight 454.40 g/mol
Exact Mass 454.10123016 g/mol
Topological Polar Surface Area (TPSA) 149.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.67
H-Bond Acceptor 9
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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35303-14-1
CHEBI:31751
(1R,2R,3R,4S)-11-diazo-2,4,9-trihydroxy-2-methyl-5,10-dioxo-2,3,4,5,10,11-hexahydro-1H-benzo[b]fluorene-1,3-diyl diacetate
BRN 0505073
CHEMBL215875
SCHEMBL3890061
DTXSID80956738
FL-120D
5H-Benzo(b)carbazole-5-carbonitrile, 2,4-bis(acetyloxy)-1,2,3,4,6,11-hexahydro-1,3,7-trihydroxy-3-methyl-6,11-dioxo-
Q27114678
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Kinamycin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9165 91.65%
Caco-2 - 0.7198 71.98%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.7506 75.06%
OATP2B1 inhibitior - 0.7047 70.47%
OATP1B1 inhibitior + 0.9038 90.38%
OATP1B3 inhibitior + 0.9262 92.62%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.7051 70.51%
P-glycoprotein inhibitior + 0.5765 57.65%
P-glycoprotein substrate - 0.5138 51.38%
CYP3A4 substrate + 0.6762 67.62%
CYP2C9 substrate - 0.8021 80.21%
CYP2D6 substrate - 0.8916 89.16%
CYP3A4 inhibition - 0.8486 84.86%
CYP2C9 inhibition - 0.6003 60.03%
CYP2C19 inhibition - 0.6472 64.72%
CYP2D6 inhibition - 0.8327 83.27%
CYP1A2 inhibition + 0.5262 52.62%
CYP2C8 inhibition + 0.5402 54.02%
CYP inhibitory promiscuity + 0.5539 55.39%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.6800 68.00%
Carcinogenicity (trinary) Non-required 0.4282 42.82%
Eye corrosion - 0.9810 98.10%
Eye irritation - 0.8367 83.67%
Skin irritation - 0.7326 73.26%
Skin corrosion - 0.9317 93.17%
Ames mutagenesis + 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5985 59.85%
Micronuclear + 0.7700 77.00%
Hepatotoxicity - 0.6250 62.50%
skin sensitisation - 0.8177 81.77%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.6333 63.33%
Mitochondrial toxicity + 0.6500 65.00%
Nephrotoxicity + 0.7205 72.05%
Acute Oral Toxicity (c) III 0.5545 55.45%
Estrogen receptor binding + 0.7050 70.50%
Androgen receptor binding + 0.6574 65.74%
Thyroid receptor binding - 0.5965 59.65%
Glucocorticoid receptor binding - 0.5055 50.55%
Aromatase binding - 0.5291 52.91%
PPAR gamma + 0.8042 80.42%
Honey bee toxicity - 0.6373 63.73%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.9968 99.68%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.52% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.63% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.22% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.79% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.02% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.37% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.09% 99.23%
CHEMBL1937 Q92769 Histone deacetylase 2 88.58% 94.75%
CHEMBL340 P08684 Cytochrome P450 3A4 88.45% 91.19%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.45% 86.33%
CHEMBL2996 Q05655 Protein kinase C delta 82.26% 97.79%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.20% 94.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 81.96% 93.99%
CHEMBL5103 Q969S8 Histone deacetylase 10 81.64% 90.08%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.24% 95.89%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 81.06% 85.14%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 81.06% 94.62%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.05% 95.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 135440049
LOTUS LTS0080435
wikiData Q27114678