Kigamicin D

Details

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Internal ID d1c11f7d-3156-4c42-8365-5149fbfd0a00
Taxonomy Organoheterocyclic compounds > Naphthopyrans > Naphthopyranones > Naphthopyranone glycosides
IUPAC Name 2,6,9,30-tetrahydroxy-8-[5-[5-(5-hydroxy-4-methoxy-6-methyloxan-2-yl)oxy-4-methoxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-23-methyl-11,14,16,24-tetraoxa-27-azaoctacyclo[15.14.1.03,12.05,10.013,32.019,31.021,29.023,27]dotriaconta-1(32),2,5(10),12,19,21(29),30-heptaene-4,28-dione
SMILES (Canonical) CC1C(CCC(O1)OC2CC(C3=C(C2O)OC4=C5C6=C(C7=C(C8=C(CC9(N(C8=O)CCO9)C)C=C7CC6OCO5)O)C(=C4C3=O)O)O)OC1CC(C(C(O1)C)OC1CC(C(C(O1)C)O)OC)OC
SMILES (Isomeric) CC1C(CCC(O1)OC2CC(C3=C(C2O)OC4=C5C6=C(C7=C(C8=C(CC9(N(C8=O)CCO9)C)C=C7CC6OCO5)O)C(=C4C3=O)O)O)OC1CC(C(C(O1)C)OC1CC(C(C(O1)C)O)OC)OC
InChI InChI=1S/C48H59NO19/c1-18-24(65-30-15-28(58-6)43(20(3)64-30)67-31-14-26(57-5)38(51)19(2)63-31)7-8-29(62-18)66-27-13-23(50)34-41(54)37-42(55)36-32-21(11-22-16-48(4)49(9-10-61-48)47(56)33(22)40(32)53)12-25-35(36)45(60-17-59-25)46(37)68-44(34)39(27)52/h11,18-20,23-31,38-39,43,50-53,55H,7-10,12-17H2,1-6H3
InChI Key OZWBBSBTBYGVTM-UHFFFAOYSA-N
Popularity 6 references in papers

Physical and Chemical Properties

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Molecular Formula C48H59NO19
Molecular Weight 954.00 g/mol
Exact Mass 953.36812865 g/mol
Topological Polar Surface Area (TPSA) 249.00 Ų
XlogP 2.10
Atomic LogP (AlogP) 3.39
H-Bond Acceptor 19
H-Bond Donor 5
Rotatable Bonds 8

Synonyms

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2,6,9,30-Tetrahydroxy-8-[5-[5-(5-hydroxy-4-methoxy-6-methyloxan-2-yl)oxy-4-methoxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-23-methyl-11,14,16,24-tetraoxa-27-azaoctacyclo[15.14.1.03,12.05,10.013,32.019,31.021,29.023,27]dotriaconta-1(32),2,5(10),12,19,21(29),30-heptaene-4,28-dione

2D Structure

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2D Structure of Kigamicin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6355 63.55%
Caco-2 - 0.8609 86.09%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.5374 53.74%
OATP2B1 inhibitior - 0.7342 73.42%
OATP1B1 inhibitior + 0.8210 82.10%
OATP1B3 inhibitior + 0.9254 92.54%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.9099 90.99%
BSEP inhibitior + 0.8967 89.67%
P-glycoprotein inhibitior + 0.7464 74.64%
P-glycoprotein substrate + 0.8270 82.70%
CYP3A4 substrate + 0.7392 73.92%
CYP2C9 substrate - 0.6084 60.84%
CYP2D6 substrate - 0.8598 85.98%
CYP3A4 inhibition + 0.6654 66.54%
CYP2C9 inhibition - 0.8310 83.10%
CYP2C19 inhibition - 0.7288 72.88%
CYP2D6 inhibition - 0.8470 84.70%
CYP1A2 inhibition - 0.9243 92.43%
CYP2C8 inhibition + 0.7494 74.94%
CYP inhibitory promiscuity - 0.8351 83.51%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5314 53.14%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9028 90.28%
Skin irritation - 0.7934 79.34%
Skin corrosion - 0.9421 94.21%
Ames mutagenesis - 0.5570 55.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7093 70.93%
Micronuclear + 0.6500 65.00%
Hepatotoxicity - 0.5466 54.66%
skin sensitisation - 0.8888 88.88%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9750 97.50%
Nephrotoxicity - 0.7488 74.88%
Acute Oral Toxicity (c) III 0.5964 59.64%
Estrogen receptor binding + 0.8725 87.25%
Androgen receptor binding + 0.7770 77.70%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.7659 76.59%
Aromatase binding + 0.7234 72.34%
PPAR gamma + 0.8064 80.64%
Honey bee toxicity - 0.6251 62.51%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.6200 62.00%
Fish aquatic toxicity + 0.8895 88.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.66% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.77% 98.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 96.40% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.38% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.21% 86.33%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 94.36% 96.77%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.65% 97.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.48% 85.14%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 90.96% 96.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.21% 92.94%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.85% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.67% 96.09%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 89.67% 85.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.24% 100.00%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 88.23% 91.03%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 87.64% 94.42%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.98% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.29% 97.14%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.93% 92.62%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 85.90% 97.33%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 85.89% 97.21%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.51% 96.21%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.09% 90.71%
CHEMBL2095226 P05556 Integrin alpha-5/beta-1 83.29% 96.39%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 82.93% 93.40%
CHEMBL4940 P07195 L-lactate dehydrogenase B chain 82.39% 95.53%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 82.28% 93.04%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 81.93% 80.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.73% 94.45%
CHEMBL4208 P20618 Proteasome component C5 81.23% 90.00%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 81.14% 95.64%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.68% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.41% 99.23%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.01% 85.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 10056728
LOTUS LTS0158702
wikiData Q75069390