Kendomycin D

Details

Top
Internal ID 98a4df6f-d750-4c45-8bc4-f4b136266c3c
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > N-acyl-alpha amino acids
IUPAC Name (2S)-2-acetamido-3-[[(1R,9S,10S,12S,14E,16S,19R,20R,21S,22R)-3,9-dihydroxy-10,12,14,16,20,21,22-heptamethyl-4-oxo-23,24-dioxatetracyclo[17.3.1.16,9.02,7]tetracosa-2,5,7,14-tetraen-8-yl]sulfanyl]propanoic acid
SMILES (Canonical) CC1CCC2C(C(C(C(O2)C3=C(C(=O)C=C4C3=C(C(O4)(C(CC(CC(=C1)C)C)C)O)SCC(C(=O)O)NC(=O)C)O)C)C)C
SMILES (Isomeric) C[C@H]\1CC[C@@H]2[C@@H]([C@@H]([C@H]([C@@H](O2)C3=C(C(=O)C=C4C3=C([C@@](O4)([C@H](C[C@@H](C/C(=C1)/C)C)C)O)SC[C@H](C(=O)O)NC(=O)C)O)C)C)C
InChI InChI=1S/C34H49NO8S/c1-16-9-10-26-21(6)20(5)22(7)31(42-26)29-28-27(14-25(37)30(29)38)43-34(41,19(4)13-18(3)12-17(2)11-16)32(28)44-15-24(33(39)40)35-23(8)36/h11,14,16,18-22,24,26,31,38,41H,9-10,12-13,15H2,1-8H3,(H,35,36)(H,39,40)/b17-11+/t16-,18+,19-,20-,21+,22+,24+,26+,31+,34-/m0/s1
InChI Key QWQCRFWOSZYFRF-XZDRQHPQSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C34H49NO8S
Molecular Weight 631.80 g/mol
Exact Mass 631.31788869 g/mol
Topological Polar Surface Area (TPSA) 168.00 Ų
XlogP 4.20
Atomic LogP (AlogP) 5.66
H-Bond Acceptor 8
H-Bond Donor 4
Rotatable Bonds 5

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of Kendomycin D

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7289 72.89%
Caco-2 - 0.8207 82.07%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.6138 61.38%
OATP2B1 inhibitior - 0.7152 71.52%
OATP1B1 inhibitior + 0.8080 80.80%
OATP1B3 inhibitior + 0.9285 92.85%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.8231 82.31%
P-glycoprotein inhibitior + 0.7366 73.66%
P-glycoprotein substrate + 0.6898 68.98%
CYP3A4 substrate + 0.7167 71.67%
CYP2C9 substrate - 0.5953 59.53%
CYP2D6 substrate - 0.8776 87.76%
CYP3A4 inhibition - 0.8339 83.39%
CYP2C9 inhibition - 0.8195 81.95%
CYP2C19 inhibition - 0.8026 80.26%
CYP2D6 inhibition - 0.9248 92.48%
CYP1A2 inhibition - 0.8644 86.44%
CYP2C8 inhibition + 0.6444 64.44%
CYP inhibitory promiscuity - 0.8583 85.83%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Danger 0.4544 45.44%
Eye corrosion - 0.9868 98.68%
Eye irritation - 0.9378 93.78%
Skin irritation - 0.6837 68.37%
Skin corrosion - 0.9168 91.68%
Ames mutagenesis + 0.5130 51.30%
Human Ether-a-go-go-Related Gene inhibition - 0.5595 55.95%
Micronuclear + 0.6500 65.00%
Hepatotoxicity + 0.6767 67.67%
skin sensitisation - 0.8454 84.54%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity + 0.8536 85.36%
Acute Oral Toxicity (c) III 0.5662 56.62%
Estrogen receptor binding + 0.8288 82.88%
Androgen receptor binding + 0.7515 75.15%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.8397 83.97%
Aromatase binding + 0.7744 77.44%
PPAR gamma + 0.7448 74.48%
Honey bee toxicity - 0.7838 78.38%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9484 94.84%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.77% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.28% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.43% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.24% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.08% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.06% 99.23%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.89% 95.56%
CHEMBL221 P23219 Cyclooxygenase-1 89.23% 90.17%
CHEMBL3359 P21462 Formyl peptide receptor 1 87.04% 93.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.04% 99.17%
CHEMBL5028 O14672 ADAM10 85.48% 97.50%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 85.14% 90.71%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.18% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.79% 86.33%
CHEMBL340 P08684 Cytochrome P450 3A4 82.18% 91.19%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 145721316
LOTUS LTS0205331
wikiData Q105229331