Karavilagenin D

Details

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Internal ID 9dfbbf3e-9caa-4bb0-88e7-58e803b1c963
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Cucurbitacins
IUPAC Name (1R,4S,5S,8R,9R,12S,13S,16S)-16-hydroxy-8-[(E,2R)-6-hydroxy-6-methylhept-4-en-2-yl]-5,9,17,17-tetramethyl-18-oxapentacyclo[10.5.2.01,13.04,12.05,9]nonadec-2-en-19-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C30H46O4/c1-19(9-8-14-25(2,3)33)20-12-15-28(7)21-13-16-30-22(10-11-23(31)26(30,4)5)29(21,24(32)34-30)18-17-27(20,28)6/h8,13-14,16,19-23,31,33H,9-12,15,17-18H2,1-7H3/b14-8+/t19-,20-,21+,22+,23+,27-,28+,29+,30-/m1/s1
InChI Key CUJVAMKVNDHSSR-DLGSBZDHSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C30H46O4
Molecular Weight 470.70 g/mol
Exact Mass 470.33960994 g/mol
Topological Polar Surface Area (TPSA) 66.80 Ų
XlogP 5.90
Atomic LogP (AlogP) 5.82
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

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934739-29-4
AKOS040761944
FS-9172
HY-111070
CS-0034148
(1R,4S,5S,8R,9R,12S,13S,16S)-16-hydroxy-8-[(E,2R)-6-hydroxy-6-methylhept-4-en-2-yl]-5,9,17,17-tetramethyl-18-oxapentacyclo[10.5.2.01,13.04,12.05,9]nonadec-2-en-19-one

2D Structure

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2D Structure of Karavilagenin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9870 98.70%
Caco-2 - 0.6022 60.22%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.6779 67.79%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8401 84.01%
OATP1B3 inhibitior + 0.9155 91.55%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.9182 91.82%
P-glycoprotein inhibitior + 0.5807 58.07%
P-glycoprotein substrate - 0.5377 53.77%
CYP3A4 substrate + 0.6887 68.87%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8081 80.81%
CYP3A4 inhibition - 0.6248 62.48%
CYP2C9 inhibition - 0.8442 84.42%
CYP2C19 inhibition - 0.7954 79.54%
CYP2D6 inhibition - 0.9671 96.71%
CYP1A2 inhibition - 0.8143 81.43%
CYP2C8 inhibition + 0.4606 46.06%
CYP inhibitory promiscuity - 0.9027 90.27%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6133 61.33%
Eye corrosion - 0.9928 99.28%
Eye irritation - 0.9515 95.15%
Skin irritation + 0.5699 56.99%
Skin corrosion - 0.9171 91.71%
Ames mutagenesis - 0.6561 65.61%
Human Ether-a-go-go-Related Gene inhibition + 0.8281 82.81%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.5073 50.73%
skin sensitisation - 0.8029 80.29%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.5965 59.65%
Acute Oral Toxicity (c) I 0.6824 68.24%
Estrogen receptor binding + 0.8662 86.62%
Androgen receptor binding + 0.7364 73.64%
Thyroid receptor binding + 0.7007 70.07%
Glucocorticoid receptor binding + 0.8023 80.23%
Aromatase binding + 0.7481 74.81%
PPAR gamma + 0.6113 61.13%
Honey bee toxicity - 0.7811 78.11%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9916 99.16%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.77% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.52% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.91% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.50% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.24% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.36% 94.45%
CHEMBL2179 P04062 Beta-glucocerebrosidase 89.98% 85.31%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.88% 95.89%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 88.55% 92.88%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 87.53% 96.77%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.50% 97.09%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.39% 100.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.34% 91.07%
CHEMBL2996 Q05655 Protein kinase C delta 82.91% 97.79%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.89% 89.00%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 82.81% 89.34%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.40% 100.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.82% 100.00%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 81.80% 93.00%
CHEMBL5555 O00767 Acyl-CoA desaturase 81.28% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Momordica charantia

Cross-Links

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PubChem 57330179
LOTUS LTS0139757
wikiData Q104970316