Kanokoside D

Details

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Internal ID 3c2bd7c7-fcbb-4c98-9a5c-365c16ae51b6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name [(1S,4aS,6S,7R,7aS)-6-hydroxy-7-(hydroxymethyl)-4-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxymethyl]-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-1-yl] 3-methylbutanoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H44O16/c1-10(2)3-17(31)43-25-18-12(4-14(30)13(18)5-28)11(7-38-25)8-39-26-24(37)22(35)20(33)16(42-26)9-40-27-23(36)21(34)19(32)15(6-29)41-27/h7,10,12-16,18-30,32-37H,3-6,8-9H2,1-2H3/t12-,13-,14+,15-,16-,18+,19-,20-,21+,22+,23-,24-,25+,26-,27-/m1/s1
InChI Key AKTRFOPOAKDICT-GHHIWPQQSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C27H44O16
Molecular Weight 624.60 g/mol
Exact Mass 624.26293531 g/mol
Topological Polar Surface Area (TPSA) 255.00 Ų
XlogP -3.30
Atomic LogP (AlogP) -3.94
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 11

Synonyms

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64703-88-4
beta-D-Glucopyranoside, [(1S,4aS,6S,7R,7aS)-1,4a,5,6,7,7a-hexahydro-6-hydroxy-7-(hydroxymethyl)-1-(3-methyl-1-oxobutoxy)cyclopenta[c]pyran-4-yl]methyl 6-O-beta-D-glucopyranosyl-
CHEBI:81084
DTXSID301099114
AKOS040734594
NCGC00384617-01
C17431
Q27155042
NCGC00384617-01_C27H44O16_(1S,4aS,6S,7R,7aS)-4-({[6-O-(beta-D-Glucopyranosyl)-beta-D-glucopyranosyl]oxy}methyl)-6-hydroxy-7-(hydroxymethyl)-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-1-yl 3-methylbutanoate

2D Structure

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2D Structure of Kanokoside D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6863 68.63%
Caco-2 - 0.8673 86.73%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.7766 77.66%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7865 78.65%
OATP1B3 inhibitior + 0.9325 93.25%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.7923 79.23%
P-glycoprotein inhibitior - 0.5289 52.89%
P-glycoprotein substrate - 0.6466 64.66%
CYP3A4 substrate + 0.6311 63.11%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8741 87.41%
CYP3A4 inhibition - 0.9093 90.93%
CYP2C9 inhibition - 0.9154 91.54%
CYP2C19 inhibition - 0.8494 84.94%
CYP2D6 inhibition - 0.8622 86.22%
CYP1A2 inhibition - 0.8773 87.73%
CYP2C8 inhibition - 0.6435 64.35%
CYP inhibitory promiscuity - 0.8955 89.55%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7012 70.12%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9346 93.46%
Skin irritation - 0.7734 77.34%
Skin corrosion - 0.9560 95.60%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7762 77.62%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.6965 69.65%
skin sensitisation - 0.8706 87.06%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.6511 65.11%
Acute Oral Toxicity (c) III 0.5223 52.23%
Estrogen receptor binding + 0.7014 70.14%
Androgen receptor binding + 0.6116 61.16%
Thyroid receptor binding - 0.5720 57.20%
Glucocorticoid receptor binding - 0.5180 51.80%
Aromatase binding + 0.5636 56.36%
PPAR gamma + 0.5885 58.85%
Honey bee toxicity - 0.7590 75.90%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity + 0.9224 92.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.29% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.20% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 95.04% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.89% 97.09%
CHEMBL2581 P07339 Cathepsin D 92.77% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.74% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 88.74% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.81% 89.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.99% 96.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.27% 86.92%
CHEMBL5255 O00206 Toll-like receptor 4 83.23% 92.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.82% 86.33%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.52% 95.89%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 82.08% 97.21%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.60% 96.95%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 81.47% 82.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 80.14% 93.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Valeriana officinalis

Cross-Links

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PubChem 46173908
LOTUS LTS0272333
wikiData Q27155042