Isomargaritene

Details

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Internal ID c0a67152-c3f6-447f-93e6-2f6e4f6dad42
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid C-glycosides
IUPAC Name 6-[4,5-dihydroxy-6-(hydroxymethyl)-3-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyoxan-2-yl]-5,7-dihydroxy-2-(4-methoxyphenyl)chromen-4-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H32O14/c1-10-20(32)23(35)25(37)28(39-10)42-27-24(36)21(33)17(9-29)41-26(27)19-14(31)8-16-18(22(19)34)13(30)7-15(40-16)11-3-5-12(38-2)6-4-11/h3-8,10,17,20-21,23-29,31-37H,9H2,1-2H3
InChI Key JIKPWRRUSIBFLE-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C28H32O14
Molecular Weight 592.50 g/mol
Exact Mass 592.17920569 g/mol
Topological Polar Surface Area (TPSA) 225.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.75
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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PCA27111

2D Structure

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2D Structure of Isomargaritene

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5074 50.74%
Caco-2 - 0.8943 89.43%
Blood Brain Barrier - 0.9000 90.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.6238 62.38%
OATP2B1 inhibitior - 0.7018 70.18%
OATP1B1 inhibitior + 0.7946 79.46%
OATP1B3 inhibitior + 0.9678 96.78%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.6018 60.18%
P-glycoprotein inhibitior - 0.6545 65.45%
P-glycoprotein substrate - 0.5771 57.71%
CYP3A4 substrate + 0.6536 65.36%
CYP2C9 substrate - 0.8555 85.55%
CYP2D6 substrate - 0.8543 85.43%
CYP3A4 inhibition - 0.8862 88.62%
CYP2C9 inhibition - 0.9258 92.58%
CYP2C19 inhibition - 0.9329 93.29%
CYP2D6 inhibition - 0.9457 94.57%
CYP1A2 inhibition - 0.9089 90.89%
CYP2C8 inhibition + 0.6598 65.98%
CYP inhibitory promiscuity - 0.7195 71.95%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7238 72.38%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9267 92.67%
Skin irritation - 0.8305 83.05%
Skin corrosion - 0.9609 96.09%
Ames mutagenesis + 0.5299 52.99%
Human Ether-a-go-go-Related Gene inhibition + 0.6486 64.86%
Micronuclear + 0.6733 67.33%
Hepatotoxicity - 0.8625 86.25%
skin sensitisation - 0.9389 93.89%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.9522 95.22%
Acute Oral Toxicity (c) III 0.6799 67.99%
Estrogen receptor binding + 0.8261 82.61%
Androgen receptor binding + 0.7465 74.65%
Thyroid receptor binding + 0.5656 56.56%
Glucocorticoid receptor binding + 0.6850 68.50%
Aromatase binding + 0.6218 62.18%
PPAR gamma + 0.7297 72.97%
Honey bee toxicity - 0.7297 72.97%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.7522 75.22%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.82% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 97.75% 94.00%
CHEMBL2581 P07339 Cathepsin D 97.61% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.63% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.73% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.70% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.14% 86.33%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 94.03% 99.15%
CHEMBL1951 P21397 Monoamine oxidase A 93.58% 91.49%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 93.18% 86.92%
CHEMBL3714130 P46095 G-protein coupled receptor 6 89.81% 97.36%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 89.71% 83.57%
CHEMBL3401 O75469 Pregnane X receptor 87.57% 94.73%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 84.97% 81.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.45% 97.09%
CHEMBL1907 P15144 Aminopeptidase N 83.57% 93.31%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.39% 96.21%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.15% 96.00%
CHEMBL4208 P20618 Proteasome component C5 81.93% 90.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.67% 95.89%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.53% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Citrus japonica

Cross-Links

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PubChem 74977542
LOTUS LTS0122653
wikiData Q105129153