Isocubebin

Details

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Internal ID a41690d2-f455-4fe0-9b31-3169054f0207
Taxonomy Lignans, neolignans and related compounds > Furanoid lignans > Tetrahydrofuran lignans > 9,9-epoxylignans
IUPAC Name (R)-1,3-benzodioxol-5-yl-[(3R,4R)-4-(1,3-benzodioxol-5-ylmethyl)oxolan-3-yl]methanol
SMILES (Canonical) C1C(C(CO1)C(C2=CC3=C(C=C2)OCO3)O)CC4=CC5=C(C=C4)OCO5
SMILES (Isomeric) C1[C@@H]([C@H](CO1)[C@H](C2=CC3=C(C=C2)OCO3)O)CC4=CC5=C(C=C4)OCO5
InChI InChI=1S/C20H20O6/c21-20(13-2-4-17-19(7-13)26-11-24-17)15-9-22-8-14(15)5-12-1-3-16-18(6-12)25-10-23-16/h1-4,6-7,14-15,20-21H,5,8-11H2/t14-,15-,20-/m0/s1
InChI Key DQAKTWJMKAIIDV-AVYPCKFXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C20H20O6
Molecular Weight 356.40 g/mol
Exact Mass 356.12598835 g/mol
Topological Polar Surface Area (TPSA) 66.40 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.68
H-Bond Acceptor 6
H-Bond Donor 1
Rotatable Bonds 4

Synonyms

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CHEMBL578223

2D Structure

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2D Structure of Isocubebin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9551 95.51%
Caco-2 + 0.5973 59.73%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7320 73.20%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9241 92.41%
OATP1B3 inhibitior + 0.9478 94.78%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.8819 88.19%
P-glycoprotein inhibitior + 0.6396 63.96%
P-glycoprotein substrate - 0.7882 78.82%
CYP3A4 substrate - 0.5837 58.37%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.3853 38.53%
CYP3A4 inhibition + 0.6284 62.84%
CYP2C9 inhibition + 0.6369 63.69%
CYP2C19 inhibition + 0.7139 71.39%
CYP2D6 inhibition - 0.5701 57.01%
CYP1A2 inhibition + 0.6876 68.76%
CYP2C8 inhibition - 0.8084 80.84%
CYP inhibitory promiscuity + 0.5364 53.64%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.4470 44.70%
Eye corrosion - 0.9867 98.67%
Eye irritation - 0.6842 68.42%
Skin irritation - 0.6708 67.08%
Skin corrosion - 0.9355 93.55%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7249 72.49%
Micronuclear + 0.5100 51.00%
Hepatotoxicity - 0.5322 53.22%
skin sensitisation - 0.7730 77.30%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.8909 89.09%
Acute Oral Toxicity (c) III 0.5195 51.95%
Estrogen receptor binding + 0.8245 82.45%
Androgen receptor binding + 0.7185 71.85%
Thyroid receptor binding + 0.5817 58.17%
Glucocorticoid receptor binding - 0.4741 47.41%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.7803 78.03%
Honey bee toxicity - 0.7319 73.19%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.9841 98.41%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.61% 91.11%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 96.67% 96.77%
CHEMBL2581 P07339 Cathepsin D 96.62% 98.95%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 94.64% 94.80%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.50% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.09% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.56% 96.09%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 90.44% 92.62%
CHEMBL261 P00915 Carbonic anhydrase I 89.63% 96.76%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.30% 97.25%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 87.85% 93.40%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.21% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.77% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.43% 95.89%
CHEMBL4040 P28482 MAP kinase ERK2 82.69% 83.82%
CHEMBL3401 O75469 Pregnane X receptor 81.89% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.45% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Daphne feddei
Solanum aculeatissimum

Cross-Links

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PubChem 45481962
NPASS NPC18576
LOTUS LTS0189113
wikiData Q104986813