Hypoglycin B

Details

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Internal ID cd4f1d04-6cbe-4e07-adf6-2be40fe64361
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Dipeptides
IUPAC Name (2S)-2-amino-5-[[(1S)-1-carboxy-2-[(1S)-2-methylidenecyclopropyl]ethyl]amino]-5-oxopentanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C12H18N2O5/c1-6-4-7(6)5-9(12(18)19)14-10(15)3-2-8(13)11(16)17/h7-9H,1-5,13H2,(H,14,15)(H,16,17)(H,18,19)/t7-,8-,9-/m0/s1
InChI Key UYDZYCPIQSRXKU-CIUDSAMLSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C12H18N2O5
Molecular Weight 270.28 g/mol
Exact Mass 270.12157168 g/mol
Topological Polar Surface Area (TPSA) 130.00 Ų
XlogP -3.20
Atomic LogP (AlogP) -0.29
H-Bond Acceptor 4
H-Bond Donor 4
Rotatable Bonds 8

Synonyms

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Hypoglycine B
Hypoglycin B
C08280
502-37-4
AC1L9B6P
CHEBI:6332
SCHEMBL14332395
Hypoglicin B (L-gamma-Glutamyl-L-Hypoglycine A)
Q5959638
(2S)-2-amino-5-[[(1S)-1-carboxy-2-[(1S)-2-methylenecyclopropyl]ethyl]amino]-5-oxo-pentanoic acid

2D Structure

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2D Structure of Hypoglycin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6339 63.39%
Caco-2 - 0.9114 91.14%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.7659 76.59%
OATP2B1 inhibitior - 0.8547 85.47%
OATP1B1 inhibitior + 0.9389 93.89%
OATP1B3 inhibitior + 0.9396 93.96%
MATE1 inhibitior - 0.9631 96.31%
OCT2 inhibitior - 0.9322 93.22%
BSEP inhibitior - 0.9383 93.83%
P-glycoprotein inhibitior - 0.9567 95.67%
P-glycoprotein substrate - 0.8217 82.17%
CYP3A4 substrate - 0.5937 59.37%
CYP2C9 substrate + 0.5918 59.18%
CYP2D6 substrate - 0.7928 79.28%
CYP3A4 inhibition - 0.6767 67.67%
CYP2C9 inhibition - 0.8941 89.41%
CYP2C19 inhibition - 0.8803 88.03%
CYP2D6 inhibition - 0.9018 90.18%
CYP1A2 inhibition - 0.8939 89.39%
CYP2C8 inhibition - 0.9377 93.77%
CYP inhibitory promiscuity - 0.9788 97.88%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8800 88.00%
Carcinogenicity (trinary) Non-required 0.6570 65.70%
Eye corrosion - 0.9850 98.50%
Eye irritation - 0.9641 96.41%
Skin irritation - 0.8193 81.93%
Skin corrosion - 0.9247 92.47%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6640 66.40%
Micronuclear + 0.5700 57.00%
Hepatotoxicity + 0.5827 58.27%
skin sensitisation - 0.8810 88.10%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.5111 51.11%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity - 0.7640 76.40%
Acute Oral Toxicity (c) III 0.5858 58.58%
Estrogen receptor binding + 0.6379 63.79%
Androgen receptor binding - 0.7094 70.94%
Thyroid receptor binding - 0.7148 71.48%
Glucocorticoid receptor binding + 0.5766 57.66%
Aromatase binding - 0.5809 58.09%
PPAR gamma + 0.5637 56.37%
Honey bee toxicity - 0.8949 89.49%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.8813 88.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3060 Q9Y345 Glycine transporter 2 95.57% 99.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.41% 91.11%
CHEMBL221 P23219 Cyclooxygenase-1 94.18% 90.17%
CHEMBL4040 P28482 MAP kinase ERK2 94.10% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.99% 96.09%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 91.54% 92.29%
CHEMBL236 P41143 Delta opioid receptor 91.42% 99.35%
CHEMBL2581 P07339 Cathepsin D 91.01% 98.95%
CHEMBL233 P35372 Mu opioid receptor 89.78% 97.93%
CHEMBL340 P08684 Cytochrome P450 3A4 88.31% 91.19%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 88.09% 90.71%
CHEMBL3359 P21462 Formyl peptide receptor 1 86.44% 93.56%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 83.64% 82.86%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.68% 97.09%
CHEMBL220 P22303 Acetylcholinesterase 81.52% 94.45%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 80.75% 98.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Blighia sapida

Cross-Links

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PubChem 441445
LOTUS LTS0251618
wikiData Q5959638