Hymecromone

Details

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Internal ID 54012a18-33a2-47f8-ad32-be09fcb9d80b
Taxonomy Phenylpropanoids and polyketides > Coumarins and derivatives > Hydroxycoumarins > 7-hydroxycoumarins
IUPAC Name 7-hydroxy-4-methylchromen-2-one
SMILES (Canonical) CC1=CC(=O)OC2=C1C=CC(=C2)O
SMILES (Isomeric) CC1=CC(=O)OC2=C1C=CC(=C2)O
InChI InChI=1S/C10H8O3/c1-6-4-10(12)13-9-5-7(11)2-3-8(6)9/h2-5,11H,1H3
InChI Key HSHNITRMYYLLCV-UHFFFAOYSA-N
Popularity 4,260 references in papers

Physical and Chemical Properties

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Molecular Formula C10H8O3
Molecular Weight 176.17 g/mol
Exact Mass 176.047344113 g/mol
Topological Polar Surface Area (TPSA) 46.50 Ų
XlogP 1.90
Atomic LogP (AlogP) 1.81
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 0

Synonyms

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Hymecromone
90-33-5
7-HYDROXY-4-METHYLCOUMARIN
7-Hydroxy-4-methyl-2H-chromen-2-one
Imecromone
beta-Methylumbelliferone
Cantabiline
Cholestil
Mendiaxon
4-Methyl-7-hydroxycoumarin
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Hymecromone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9946 99.46%
Caco-2 + 0.8965 89.65%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.6005 60.05%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8124 81.24%
OATP1B3 inhibitior + 0.9920 99.20%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9388 93.88%
P-glycoprotein inhibitior - 0.9603 96.03%
P-glycoprotein substrate - 0.7665 76.65%
CYP3A4 substrate - 0.5747 57.47%
CYP2C9 substrate - 0.6106 61.06%
CYP2D6 substrate - 0.8733 87.33%
CYP3A4 inhibition - 0.8379 83.79%
CYP2C9 inhibition - 0.9070 90.70%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition - 0.9725 97.25%
CYP1A2 inhibition + 0.9108 91.08%
CYP2C8 inhibition - 0.6714 67.14%
CYP inhibitory promiscuity - 0.8952 89.52%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9413 94.13%
Carcinogenicity (trinary) Non-required 0.4806 48.06%
Eye corrosion - 0.9095 90.95%
Eye irritation + 1.0000 100.00%
Skin irritation + 0.7241 72.41%
Skin corrosion - 0.9735 97.35%
Ames mutagenesis - 0.9000 90.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7958 79.58%
Micronuclear + 0.7959 79.59%
Hepatotoxicity + 0.6177 61.77%
skin sensitisation - 0.8965 89.65%
Respiratory toxicity - 0.6111 61.11%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity + 0.4733 47.33%
Acute Oral Toxicity (c) III 0.8133 81.33%
Estrogen receptor binding + 0.5919 59.19%
Androgen receptor binding + 0.8412 84.12%
Thyroid receptor binding - 0.7447 74.47%
Glucocorticoid receptor binding + 0.8381 83.81%
Aromatase binding + 0.6610 66.10%
PPAR gamma - 0.5066 50.66%
Honey bee toxicity - 0.9621 96.21%
Biodegradation - 0.5250 52.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.8608 86.08%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 12589.3 nM
Potency
via CMAUP
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 15848.9 nM
Potency
via CMAUP
CHEMBL1900 P15121 Aldose reductase 24500 nM
IC50
PMID: 20805028
CHEMBL2524 P06280 Alpha-galactosidase A 28183.8 nM
Potency
via CMAUP
CHEMBL3594 Q16790 Carbonic anhydrase IX 560 nM
560 nM
Ki
Ki
PMID: 22077347
via Super-PRED
CHEMBL3242 O43570 Carbonic anhydrase XII 8100 nM
Ki
PMID: 22077347
CHEMBL4801 P29466 Caspase-1 12589.3 nM
Potency
via CMAUP
CHEMBL3468 P55210 Caspase-7 12589.3 nM
Potency
via CMAUP
CHEMBL3356 P05177 Cytochrome P450 1A2 3981.07 nM
AC50
via CMAUP
CHEMBL3397 P11712 Cytochrome P450 2C9 12589.3 nM
Potency
via CMAUP
CHEMBL4159 Q99714 Endoplasmic reticulum-associated amyloid beta-peptide-binding protein 10000 nM
2511.9 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL4234 P37058 Estradiol 17-beta-dehydrogenase 3 1000 nM
IC50
PMID: 19954971
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 19952.6 nM
Potency
via CMAUP
CHEMBL2608 P10253 Lysosomal alpha-glucosidase 25118.9 nM
Potency
via CMAUP
CHEMBL1293235 P02545 Prelamin-A/C 4.5 nM
4.5 nM
Potency
Potency
via Super-PRED
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.72% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.11% 95.56%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 94.03% 83.57%
CHEMBL2581 P07339 Cathepsin D 93.72% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.19% 89.00%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 90.06% 93.65%
CHEMBL3401 O75469 Pregnane X receptor 88.81% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.35% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.93% 86.33%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.70% 90.71%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 82.83% 90.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.43% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.12% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dalbergia volubilis
Ferula fukanensis
Reynoutria multiflora

Cross-Links

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PubChem 5280567
NPASS NPC52247
ChEMBL CHEMBL12208
LOTUS LTS0036677
wikiData Q904431