Homodimericin A

Details

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Internal ID 291f6a1a-b001-4882-860b-db744bbc7962
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name (1R,2R,3S,4S,9S,13S,18R,19S)-2,7,16-trihydroxy-6,15,19-trimethyl-2-[(1E,3E)-penta-1,3-dienyl]hexacyclo[10.7.1.03,18.04,9.09,13.013,18]icosa-6,12(20),15-triene-5,8,11,14,17-pentone
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H26O8/c1-5-6-7-8-26(36)14-9-15-16(29)10-25-17(18(30)11(2)19(31)23(25)34)21(26)27(13(14)4)24(35)20(32)12(3)22(33)28(15,25)27/h5-9,13-14,17,21,31-32,36H,10H2,1-4H3/b6-5+,8-7+/t13-,14+,17-,21+,25+,26+,27-,28-/m0/s1
InChI Key QKNJDMWFQJHKLS-JZWHQYQUSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C28H26O8
Molecular Weight 490.50 g/mol
Exact Mass 490.16276778 g/mol
Topological Polar Surface Area (TPSA) 146.00 Ų
XlogP 0.40
Atomic LogP (AlogP) 2.20
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Homodimericin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9873 98.73%
Caco-2 - 0.5860 58.60%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7638 76.38%
OATP2B1 inhibitior - 0.8471 84.71%
OATP1B1 inhibitior + 0.8565 85.65%
OATP1B3 inhibitior + 0.9626 96.26%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.5067 50.67%
P-glycoprotein inhibitior - 0.5340 53.40%
P-glycoprotein substrate - 0.5628 56.28%
CYP3A4 substrate + 0.6467 64.67%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8857 88.57%
CYP3A4 inhibition - 0.7300 73.00%
CYP2C9 inhibition - 0.8000 80.00%
CYP2C19 inhibition - 0.8374 83.74%
CYP2D6 inhibition - 0.8902 89.02%
CYP1A2 inhibition - 0.7415 74.15%
CYP2C8 inhibition - 0.6093 60.93%
CYP inhibitory promiscuity - 0.7565 75.65%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9354 93.54%
Carcinogenicity (trinary) Non-required 0.4322 43.22%
Eye corrosion - 0.9854 98.54%
Eye irritation - 0.8920 89.20%
Skin irritation + 0.5288 52.88%
Skin corrosion - 0.9063 90.63%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5000 50.00%
Micronuclear + 0.5259 52.59%
Hepatotoxicity + 0.6125 61.25%
skin sensitisation - 0.6717 67.17%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.5799 57.99%
Acute Oral Toxicity (c) III 0.3360 33.60%
Estrogen receptor binding + 0.6877 68.77%
Androgen receptor binding + 0.7467 74.67%
Thyroid receptor binding + 0.5851 58.51%
Glucocorticoid receptor binding + 0.7630 76.30%
Aromatase binding + 0.5477 54.77%
PPAR gamma + 0.6597 65.97%
Honey bee toxicity - 0.8068 80.68%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9367 93.67%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.01% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 93.90% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.75% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.12% 95.56%
CHEMBL1937 Q92769 Histone deacetylase 2 89.30% 94.75%
CHEMBL2581 P07339 Cathepsin D 88.72% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.54% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.13% 99.23%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.45% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.91% 97.09%
CHEMBL1929 P47989 Xanthine dehydrogenase 80.37% 96.12%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139588660
LOTUS LTS0089585
wikiData Q105223218